Factsheet for HORVU0Hr1G006190.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G085260.1	Barley	cytosol	70.22	79.11
HORVU3Hr1G011460.1	Barley	mitochondrion	100.0	70.08
TraesCS3A01G059200.1	Wheat	mitochondrion	93.26	64.09
TraesCS3B01G071700.1	Wheat	mitochondrion	92.7	63.71
Os01t0143300-01	Rice	mitochondrion	74.72	50.38
EES00334	Sorghum	mitochondrion, plastid	73.03	48.87
Zm00001d039883_P001	Maize	mitochondrion	63.48	44.66
GSMUA_Achr4P16890_001	Banana	mitochondrion	64.61	43.73
HORVU3Hr1G011490.1	Barley	cytosol	31.46	42.11
VIT_13s0019g02350.t01	Wine grape	mitochondrion	58.99	41.5
PGSC0003DMT400055876	Potato	mitochondrion, plastid	58.99	41.18
Solyc03g079930.2.1	Tomato	plastid	59.55	41.09
KRH15056	Soybean	mitochondrion	56.74	39.92
KRH73081	Soybean	mitochondrion	56.74	39.92
Os01t0143700-00	Rice	mitochondrion	56.18	38.61
CDX70103	Canola	mitochondrion	54.49	38.04
CDY38743	Canola	cytosol	32.58	37.91
Bra009157.1-P	Field mustard	mitochondrion	53.37	37.85
CDX98894	Canola	mitochondrion	54.49	37.6
Bra005873.1-P	Field mustard	mitochondrion	54.49	37.16
CDY11346	Canola	mitochondrion	54.49	37.16
AT5G05990.1	Thale cress	mitochondrion	52.25	35.91
Bra005013.1-P	Field mustard	mitochondrion	50.0	35.89
AT3G55605.1	Thale cress	mitochondrion	51.69	35.66
AT2G39795.1	Thale cress	mitochondrion	50.0	35.6
CDX74831	Canola	mitochondrion	49.44	35.34
CDX80981	Canola	mitochondrion	51.12	35.14
CDY20481	Canola	mitochondrion	48.88	35.08
KRH49169	Soybean	endoplasmic reticulum	48.31	33.99
CDY65769	Canola	mitochondrion, plastid	49.44	33.98
Bra014733.1-P	Field mustard	mitochondrion	48.88	33.59
KRH00042	Soybean	nucleus	47.75	33.46
CDX76083	Canola	mitochondrion	48.88	33.46
CDY55117	Canola	mitochondrion, plastid	44.94	30.89
Bra005705.1-P	Field mustard	mitochondrion, plastid	44.94	30.89
CDX80800	Canola	mitochondrion	44.94	30.89
AT5G02050.1	Thale cress	mitochondrion, plastid	46.07	30.71
Bra029083.1-P	Field mustard	mitochondrion	32.58	30.53
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	46.63	29.64
PGSC0003DMT400022948	Potato	mitochondrion	39.89	28.29
Bra029081.1-P	Field mustard	plastid	35.96	27.95
Solyc09g011250.2.1	Tomato	mitochondrion	39.33	27.89
HORVU1Hr1G072660.2	Barley	mitochondrion	39.89	27.73
AT2G39790.1	Thale cress	mitochondrion, plastid	37.08	27.5
CDY38740	Canola	plastid	36.52	26.86
CDY47064	Canola	plastid	37.08	26.83
CDY43064	Canola	plastid	35.96	26.02
Bra029050.1-P	Field mustard	plastid	35.96	26.02
HORVU3Hr1G011560.1	Barley	plastid	41.01	25.35
CDY70179	Canola	plastid	34.83	25.2
CDY70180	Canola	plastid	36.52	25.1
HORVU7Hr1G046980.1	Barley	mitochondrion	35.96	24.43
CDY43065	Canola	plastid	34.83	23.66
Bra029051.1-P	Field mustard	plastid	34.83	23.66
CDY47065	Canola	plastid	18.54	23.4
HORVU3Hr1G011510.1	Barley	plastid	37.64	16.54
HORVU3Hr1G011580.1	Barley	mitochondrion	14.61	15.85
HORVU2Hr1G113990.2	Barley	plastid	16.29	15.59
Bra029082.1-P	Field mustard	plastid	10.11	10.98
HORVU5Hr1G088460.2	Barley	mitochondrion	15.17	9.82

Protein Annotations

EnsemblPlants:HORVU0Hr1G006190.1	EnsemblPlantsGene:HORVU0Hr1G006190	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf
PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529	UniParc:UPI000B46AFD2
UniProt:A0A287DWU3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:33582812..33583798

Molecular Weight (calculated)

20502.8 Da

IEP (calculated)

4.094

GRAVY (calculated)

-0.776

Length

178 amino acids

Sequence
(BLAST)

001: VEEVPDSFPF KITDKKGFND ITLTRTYQGE KIEVLVSMPN LVTGDEPEHD QDEDDKEKDD DQDDSEKPPK STLPLTVTIT KSSSGPSLEF TCTAYPDEIL
101: IDTLSVKQPS ANLEEEDIAY EGPDFNDLDE NLQRAFHKYL ELRGITPMTT NFLHEYMINK DSREYLFWLN KLKDFVKL

Best Arabidopsis Sequence Match ( AT2G39795.1 )
(BLAST)

001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ

Arabidopsis Description

Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.