Factsheet for PGSC0003DMT400022948

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012249

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	PGSC0003DMT400012249	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g011250.2.1	Tomato	mitochondrion	92.03	92.03
HORVU0Hr1G006190.1	Barley	cytosol	28.29	39.89
PGSC0003DMT400055876	Potato	mitochondrion, plastid	40.24	39.61
KRH49169	Soybean	endoplasmic reticulum	39.04	38.74
KRH00042	Soybean	nucleus	39.04	38.58
TraesCS3B01G071700.1	Wheat	mitochondrion	39.04	37.84
TraesCS3A01G059200.1	Wheat	mitochondrion	38.65	37.45
Os01t0143300-01	Rice	mitochondrion	39.04	37.12
HORVU3Hr1G011460.1	Barley	mitochondrion	37.05	36.61
GSMUA_Achr4P16890_001	Banana	mitochondrion	37.05	35.36
CDY38743	Canola	cytosol	21.12	34.64
EES00334	Sorghum	mitochondrion, plastid	35.46	33.46
AT5G02050.1	Thale cress	mitochondrion, plastid	35.46	33.33
Os01t0143700-00	Rice	mitochondrion	34.26	33.2
Zm00001d039883_P001	Maize	mitochondrion	33.47	33.2
Bra005705.1-P	Field mustard	mitochondrion, plastid	33.86	32.82
CDY55117	Canola	mitochondrion, plastid	33.86	32.82
CDX80800	Canola	mitochondrion	33.47	32.43
HORVU3Hr1G011490.1	Barley	cytosol	16.33	30.83
Bra029081.1-P	Field mustard	plastid	27.89	30.57
Os01t0143800-01	Rice	plastid	33.47	30.55
EES00333	Sorghum	plastid	33.07	30.51
TraesCS3A01G059600.1	Wheat	plastid	31.87	29.41
TraesCS3D01G059900.1	Wheat	plastid	31.47	29.26
HORVU3Hr1G085260.1	Barley	cytosol	18.33	29.11
Zm00001d008610_P001	Maize	plastid	31.47	28.83
TraesCS3B01G072200.1	Wheat	plastid	30.68	28.52
HORVU3Hr1G011560.1	Barley	plastid	31.08	27.08
CDY38740	Canola	plastid	25.9	26.86
CDY47064	Canola	plastid	26.29	26.83
TraesCS3B01G072000.1	Wheat	mitochondrion	28.29	26.3
TraesCS3D01G059600.1	Wheat	mitochondrion	30.28	26.21
TraesCS1D01G281100.1	Wheat	mitochondrion	26.29	26.19
CDY70180	Canola	plastid	26.69	25.87
Bra029083.1-P	Field mustard	mitochondrion	19.52	25.79
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	28.69	25.71
TraesCS3D01G059700.1	Wheat	mitochondrion	28.69	25.62
Os05t0456000-01	Rice	mitochondrion	26.29	25.58
CDY47065	Canola	plastid	14.34	25.53
PGSC0003DMT400067216	Potato	mitochondrion	23.9	25.42
HORVU1Hr1G072660.2	Barley	mitochondrion	25.9	25.39
Bra029050.1-P	Field mustard	plastid	24.7	25.2
CDY43064	Canola	plastid	24.7	25.2
CDY43065	Canola	plastid	25.9	24.81
Bra029051.1-P	Field mustard	plastid	25.9	24.81
CDY70179	Canola	plastid	24.3	24.8
TraesCS1B01G291000.1	Wheat	mitochondrion	25.5	24.62
EES19636	Sorghum	mitochondrion	25.1	24.61
TraesCS3D01G059800.1	Wheat	mitochondrion	28.69	24.49
PGSC0003DMT400036809	Potato	mitochondrion	21.12	23.04
TraesCS3B01G071900.1	Wheat	mitochondrion	28.29	22.9
TraesCS3D01G059500.1	Wheat	mitochondrion	28.29	22.9
HORVU3Hr1G011580.1	Barley	mitochondrion	13.55	20.73
Bra029082.1-P	Field mustard	plastid	13.15	20.12
HORVU3Hr1G011510.1	Barley	plastid	27.09	16.79

Protein Annotations

EnsemblPlants:PGSC0003DMT400022948	EnsemblPlantsGene:PGSC0003DMG402008889	EntrezGene:102592967	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	PGSC:PGSC0003DMG402008889	RefSeq:XP_006340993.1
SEG:seg	SUPFAM:SSF54529	UniParc:UPI000294C099	UniProt:M1AHH6	MapMan:35.1	:

Description

Mitochondrial acidic protein MAM33, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG402008889]

Coordinates

chr9:-:1349368..1355285

Molecular Weight (calculated)

27923.1 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.291

Length

251 amino acids

Sequence
(BLAST)

001: MALYSAIRRA SKSTIPLALR SVATATASTV GNGHCGGASR SFSILVLHYS TSAVKKKRKH SSFDNVLLQI VDSEIKFTID SEFHDCVVDI PDDFPFKVQD
101: KAGKRVIVLT RDYGEETINI VVDMPNSRCE NVEGDAVNSE EESEPQPSIP LSVTVSKENG LSLEFDVRAF PNKISICGMS IKEPKSSSNQ LDYRGPAFSF
201: LNESLQKSVY QYLEARGLTG STANFMLEYV ISKDTKEYIR WLKNIKNFVE N

Best Arabidopsis Sequence Match ( AT3G55605.1 )
(BLAST)

001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE

Arabidopsis Description

At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.