Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G059500.1 | Wheat | mitochondrion | 93.87 | 93.87 |
| TraesCS3B01G072000.1 | Wheat | mitochondrion | 33.87 | 38.89 |
| Os01t0143300-01 | Rice | mitochondrion | 31.29 | 36.74 |
| Zm00001d039883_P001 | Maize | mitochondrion | 29.68 | 36.36 |
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 30.0 | 35.91 |
| EES00334 | Sorghum | mitochondrion, plastid | 30.0 | 34.96 |
| Bra005013.1-P | Field mustard | mitochondrion | 26.77 | 33.47 |
| AT3G55605.1 | Thale cress | mitochondrion | 27.42 | 32.95 |
| CDX74831 | Canola | mitochondrion | 26.45 | 32.93 |
| Os01t0143700-00 | Rice | mitochondrion | 26.77 | 32.05 |
| CDY20481 | Canola | mitochondrion | 25.48 | 31.85 |
| KRH49169 | Soybean | endoplasmic reticulum | 25.81 | 31.62 |
| AT2G39795.1 | Thale cress | mitochondrion | 25.48 | 31.6 |
| KRH00042 | Soybean | nucleus | 25.81 | 31.5 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 27.1 | 31.46 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 26.45 | 31.18 |
| VIT_13s0019g02350.t01 | Wine grape | mitochondrion | 24.84 | 30.43 |
| KRH15056 | Soybean | mitochondrion | 24.84 | 30.43 |
| Bra014733.1-P | Field mustard | mitochondrion | 25.16 | 30.12 |
| CDY38743 | Canola | cytosol | 14.84 | 30.07 |
| KRH73081 | Soybean | mitochondrion | 24.19 | 29.64 |
| Bra009157.1-P | Field mustard | mitochondrion | 23.87 | 29.48 |
| CDX70103 | Canola | mitochondrion | 24.19 | 29.41 |
| AT5G05990.1 | Thale cress | mitochondrion | 24.52 | 29.34 |
| CDX76083 | Canola | mitochondrion | 24.52 | 29.23 |
| CDX98894 | Canola | mitochondrion | 24.19 | 29.07 |
| CDX80800 | Canola | mitochondrion | 24.19 | 28.96 |
| Solyc03g079930.2.1 | Tomato | plastid | 23.87 | 28.68 |
| PGSC0003DMT400055876 | Potato | mitochondrion, plastid | 23.55 | 28.63 |
| CDY11346 | Canola | mitochondrion | 23.87 | 28.35 |
| Bra005873.1-P | Field mustard | mitochondrion | 23.87 | 28.35 |
| PGSC0003DMT400022948 | Potato | mitochondrion | 22.9 | 28.29 |
| CDY65769 | Canola | mitochondrion, plastid | 23.55 | 28.19 |
| CDY55117 | Canola | mitochondrion, plastid | 23.55 | 28.19 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 23.23 | 27.8 |
| Bra029081.1-P | Field mustard | plastid | 20.32 | 27.51 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 21.29 | 27.5 |
| Solyc09g011250.2.1 | Tomato | mitochondrion | 22.26 | 27.49 |
| TraesCS1B01G291000.1 | Wheat | mitochondrion | 22.9 | 27.31 |
| CDY47065 | Canola | plastid | 12.26 | 26.95 |
| CDY38740 | Canola | plastid | 20.65 | 26.45 |
| CDY47064 | Canola | plastid | 20.97 | 26.42 |
| TraesCS3B01G072200.1 | Wheat | plastid | 22.9 | 26.3 |
| CDX80981 | Canola | mitochondrion | 21.94 | 26.25 |
| CDY70180 | Canola | plastid | 20.32 | 24.32 |
| Bra029083.1-P | Field mustard | mitochondrion | 14.84 | 24.21 |
| TraesCS7B01G193700.1 | Wheat | mitochondrion | 20.65 | 24.06 |
| CDY43065 | Canola | plastid | 20.32 | 24.05 |
| Bra029051.1-P | Field mustard | plastid | 20.32 | 24.05 |
| CDY43064 | Canola | plastid | 18.06 | 22.76 |
| Bra029050.1-P | Field mustard | plastid | 18.06 | 22.76 |
| TraesCS2B01G542100.1 | Wheat | mitochondrion | 16.13 | 22.52 |
| CDY70179 | Canola | plastid | 17.74 | 22.36 |
| TraesCS5B01G360700.1 | Wheat | mitochondrion | 16.13 | 21.19 |
| Bra029082.1-P | Field mustard | plastid | 10.32 | 19.51 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G071900.1 | EnsemblPlantsGene:TraesCS3B01G071900 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 | InterPro:MAM33_sf |
| PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | PFAM:PF02330 | SEG:seg | SUPFAM:SSF54529 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:-:43345241..43346598
Molecular Weight (calculated)
33945.8 Da
IEP (calculated)
4.616
GRAVY (calculated)
-0.381
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLAAARRA SSLPSLRRAS TLLRPTSSSA MASRWSSSSS LDAAVSSFES SGASLIAALD SYRQSTVTEE SARTVLGPIR AFLTETESLS ATMFDLELLG
101: AIDSAIKSRN NDGQAPTELQ CLLAKIEETG DYFPFEISEN KCRSSITLTR TLKGEKIEVV ASKPCLDDDD DENNSSCTSH EDVESPSASS NENLEEDGGQ
201: KNKLRSSINL EVTISKGDGS KLAFTCLAYP DNITIHSMCM LSRTDKDDVQ ATYYDFDKLD ENLQKSFVKY LDMRGVTPTT TNLLRVYLSS KVQSKDLLML
301: TKLQDFVKKD
101: AIDSAIKSRN NDGQAPTELQ CLLAKIEETG DYFPFEISEN KCRSSITLTR TLKGEKIEVV ASKPCLDDDD DENNSSCTSH EDVESPSASS NENLEEDGGQ
201: KNKLRSSINL EVTISKGDGS KLAFTCLAYP DNITIHSMCM LSRTDKDDVQ ATYYDFDKLD ENLQKSFVKY LDMRGVTPTT TNLLRVYLSS KVQSKDLLML
301: TKLQDFVKKD
001: MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ
101: PGNQNVTLTR DYNGEHIKVV VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK HPGDSLEDQL ANEGPDFEDL
201: DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW LKNVKEFMEQ
Arabidopsis Description
Uncharacterized protein At2g39795, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W487]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.