Factsheet for Bra014733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002567.1-P
Bra022051.1-P
Bra022079.1-P
Bra022080.1-P
Bra022083.1-P
Bra022085.2-P
Bra024930.1-P
Bra024932.1-P
Bra024976.1-P
Bra034108.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55605.1	Bra002567.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra022051.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra022079.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra022080.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra022083.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra022085.2-P	AT5G47590.1	21798944
AT3G55605.1	Bra024930.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra024932.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra024976.1-P	AT5G47590.1	21798944
AT3G55605.1	Bra034108.1-P	AT5G47590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76083	Canola	mitochondrion	97.68	97.31
CDY65769	Canola	mitochondrion, plastid	94.59	94.59
AT3G55605.1	Thale cress	mitochondrion	79.54	79.84
Bra005013.1-P	Field mustard	mitochondrion	57.92	60.48
HORVU0Hr1G006190.1	Barley	cytosol	33.59	48.88
Bra009157.1-P	Field mustard	mitochondrion	42.08	43.43
GSMUA_Achr4P16890_001	Banana	mitochondrion	41.7	41.06
HORVU3Hr1G011460.1	Barley	mitochondrion	40.15	40.94
TraesCS3A01G059200.1	Wheat	mitochondrion	40.54	40.54
Os01t0143300-01	Rice	mitochondrion	41.31	40.53
Bra005873.1-P	Field mustard	mitochondrion	40.15	39.85
TraesCS3B01G071700.1	Wheat	mitochondrion	39.77	39.77
EES00334	Sorghum	mitochondrion, plastid	40.15	39.1
HORVU3Hr1G011490.1	Barley	cytosol	19.69	38.35
Bra005705.1-P	Field mustard	mitochondrion, plastid	38.22	38.22
Zm00001d039883_P001	Maize	mitochondrion	37.07	37.94
HORVU3Hr1G085260.1	Barley	cytosol	21.62	35.44
Bra029081.1-P	Field mustard	plastid	30.12	34.06
Os01t0143700-00	Rice	mitochondrion	33.59	33.59
Bra029050.1-P	Field mustard	plastid	30.5	32.11
TraesCS3A01G059600.1	Wheat	plastid	33.2	31.62
TraesCS3D01G059900.1	Wheat	plastid	32.82	31.48
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	33.98	31.43
TraesCS3B01G072200.1	Wheat	plastid	32.05	30.74
TraesCS3B01G072000.1	Wheat	mitochondrion	32.05	30.74
TraesCS3D01G059700.1	Wheat	mitochondrion	33.2	30.61
Bra029083.1-P	Field mustard	mitochondrion	22.39	30.53
Bra029051.1-P	Field mustard	plastid	30.5	30.15
EES00333	Sorghum	plastid	30.12	28.68
TraesCS1D01G281100.1	Wheat	mitochondrion	27.8	28.57
HORVU3Hr1G011560.1	Barley	plastid	31.66	28.47
Zm00001d008610_P001	Maize	plastid	30.12	28.47
TraesCS3D01G059800.1	Wheat	mitochondrion	32.05	28.23
Os01t0143800-01	Rice	plastid	29.73	28.0
EES19636	Sorghum	mitochondrion	27.41	27.73
Os05t0456000-01	Rice	mitochondrion	26.25	26.36
Bra035158.1-P	Field mustard	mitochondrion	24.32	26.03
HORVU1Hr1G072660.2	Barley	mitochondrion	25.48	25.78
TraesCS1B01G291000.1	Wheat	mitochondrion	25.87	25.77
Bra026096.1-P	Field mustard	mitochondrion	23.94	25.62
TraesCS3B01G071900.1	Wheat	mitochondrion	30.12	25.16
TraesCS3D01G059500.1	Wheat	mitochondrion	29.73	24.84
TraesCS3D01G059600.1	Wheat	mitochondrion	27.03	24.14
HORVU3Hr1G011580.1	Barley	mitochondrion	14.67	23.17
Bra023971.1-P	Field mustard	plastid	20.46	21.12
Bra029082.1-P	Field mustard	plastid	12.36	19.51
HORVU3Hr1G011510.1	Barley	plastid	27.41	17.53

Protein Annotations

EnsemblPlants:Bra014733.1	EnsemblPlants:Bra014733.1-P	EnsemblPlantsGene:Bra014733	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI000254495B	UniProt:M4DE14	MapMan:35.1	:	:	:

Description

AT3G55605 (E=9e-097) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA04:-:2654052..2655771

Molecular Weight (calculated)

29057.8 Da

IEP (calculated)

4.471

GRAVY (calculated)

-0.573

Length

259 amino acids

Sequence
(BLAST)

001: MVFASCIRRS ASRLASVCGR VARSQAISAA VVVNRSSLAH NPSSLLRPFG SRSLLYSTDT NDRLKSDQTL IQVIDSEIKD AFDADVQGED ETPGSGDFPF
101: KIEDNPGHRT VTLTREYNGE QIRVEVSMPG SMDEHEDGMD DNEDGDEKVN ETSIPLVVTV TKKSGLSLEF SCTAFPDAIV IDGLSVNHSD KSSEEEEQLT
201: YDGPDFQELD ENMRKSFHKF LEARGIKPSV TDFMHEYMMK KDSREYLLWL KNLKNFIQE

Best Arabidopsis Sequence Match ( AT3G55605.1 )
(BLAST)

001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE

Arabidopsis Description

At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.