Factsheet for Bra026096.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35045	Canola	mitochondrion	95.87	95.87
CDY33373	Canola	mitochondrion	95.45	95.06
AT1G15870.1	Thale cress	mitochondrion	81.82	81.82
Bra035158.1-P	Field mustard	mitochondrion	64.88	64.88
KRH44530	Soybean	mitochondrion	51.24	54.15
VIT_09s0002g09050.t01	Wine grape	cytosol	42.98	53.89
PGSC0003DMT400036809	Potato	mitochondrion	47.52	50.0
Solyc03g117080.2.1	Tomato	mitochondrion	47.11	49.57
KRH47379	Soybean	mitochondrion	42.15	49.28
Bra023971.1-P	Field mustard	plastid	32.23	31.08
Bra029081.1-P	Field mustard	plastid	26.86	28.38
Bra005013.1-P	Field mustard	mitochondrion	28.51	27.82
Bra005705.1-P	Field mustard	mitochondrion, plastid	28.51	26.64
Bra005873.1-P	Field mustard	mitochondrion	26.03	24.14
Bra014733.1-P	Field mustard	mitochondrion	25.62	23.94
Bra009157.1-P	Field mustard	mitochondrion	24.79	23.9
Bra029083.1-P	Field mustard	mitochondrion	18.59	23.68
Bra029082.1-P	Field mustard	plastid	15.7	23.17
Bra029051.1-P	Field mustard	plastid	24.79	22.9
Bra029050.1-P	Field mustard	plastid	22.73	22.36

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EnsemblPlantsGene:Bra026096	EnsemblPlants:Bra026096.1	EnsemblPlants:Bra026096.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561
UniProt:M4EBD7	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16
SUPFAM:SSF54529	UniParc:UPI000253F128	:	:	:	:

Description

AT1G15870 (E=2e-112) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA06:+:6166364..6167317

Molecular Weight (calculated)

27973.1 Da

IEP (calculated)

5.448

GRAVY (calculated)

-0.531

Length

242 amino acids

Sequence
(BLAST)

001: MSRLVRCLRR TVISTNLSPS FSYRHPRVCL QPIQNSSFLT VPKFLSSGSY VSEMRKSAFE GNILRLIRSE IQSELDHSPP LKPEDRFGPF TVDERPGEQW
101: VSLRRKFGDT EDIKIEATMF DGSVPSSKST SGDPEDIQLH ITFVVNIFKD GQTLEIMCSA WPDTIQISKF FVRKSSKNSP NAYVGPEFEE MEDELQDSVY
201: QFLEERGISD DLAVFLHQYM KNKDKAEYIR WMETVKSYVE QK

Best Arabidopsis Sequence Match ( AT1G15870.1 )
(BLAST)

001: MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI
101: SLRRKFGEKE DIKIEATMFD GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP NAYIGPEFQE MEDELQDSVY
201: RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE QK

Arabidopsis Description

At1g15870/F7H2_19 [Source:UniProtKB/TrEMBL;Acc:Q9LMP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.