CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44530	Soybean	mitochondrion	85.99	77.73
VIT_09s0002g09050.t01	Wine grape	cytosol	43.96	47.15
PGSC0003DMT400036809	Potato	mitochondrion	49.28	44.35
Solyc03g117080.2.1	Tomato	mitochondrion	48.79	43.91
AT1G15870.1	Thale cress	mitochondrion	50.24	42.98
AT1G80720.2	Thale cress	mitochondrion	49.76	42.56
CDY39948	Canola	mitochondrion	49.76	42.56
CDX87337	Canola	mitochondrion	49.76	42.56
CDY33373	Canola	mitochondrion	49.76	42.39
CDY35045	Canola	mitochondrion	49.28	42.15
Bra035158.1-P	Field mustard	mitochondrion	49.28	42.15
Bra026096.1-P	Field mustard	mitochondrion	49.28	42.15
KRH15786	Soybean	mitochondrion	37.68	32.91
KRH05267	Soybean	mitochondrion	37.2	32.91
KRH73081	Soybean	mitochondrion	30.92	25.3
KRH15056	Soybean	mitochondrion	28.99	23.72
KRH49169	Soybean	endoplasmic reticulum	28.02	22.92
KRH00042	Soybean	nucleus	28.02	22.83

Protein Annotations

EMBL:ACUP02004147	EnsemblPlants:KRH47379	EnsemblPlantsGene:GLYMA_07G025400	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16	PFAM:PF02330	ProteinID:KRH47379	ProteinID:KRH47379.1
SUPFAM:SSF54529	UniParc:UPI0006EDB675	UniProt:A0A0R0J4H4	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:1988872..1989988

Molecular Weight (calculated)

23894.0 Da

IEP (calculated)

7.451

GRAVY (calculated)

-0.383

Length

207 amino acids

Sequence
(BLAST)

001: MARLIRSLRK PLTLTHQFQH QPCISRTSYI SEMRKSAFET PPQRDSVRAP ILSSQQPGER WITLKRQYAE EDIKLEVTMF GGAVPAPTPT PNGGVVNSDE
101: MQMHITVIVT ISKGEGCVLE IMCSAWPDSI EIKRLFIRAN EKIIAEPYAG PEFMELDDEL QYRLYDFLEV RGINDELACF LHQYMKNKDK AELIGWMKRV
201: KSFIERK

Best Arabidopsis Sequence Match ( AT1G15870.1 )
(BLAST)

001: MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI
101: SLRRKFGEKE DIKIEATMFD GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP NAYIGPEFQE MEDELQDSVY
201: RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE QK

Arabidopsis Description

At1g15870/F7H2_19 [Source:UniProtKB/TrEMBL;Acc:Q9LMP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.