CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15786	Soybean	mitochondrion	91.88	90.72
CDX68804	Canola	cytosol	25.21	49.58
AT4G31930.1	Thale cress	mitochondrion	49.57	49.57
CDY13466	Canola	mitochondrion	50.43	48.16
PGSC0003DMT400067216	Potato	mitochondrion	48.29	47.88
Solyc06g065800.2.1	Tomato	mitochondrion	47.86	47.46
Bra023971.1-P	Field mustard	plastid	50.85	47.41
VIT_04s0008g05940.t01	Wine grape	mitochondrion	50.0	46.8
CDX72338	Canola	plastid	50.0	46.8
KRH44530	Soybean	mitochondrion	40.17	41.05
GSMUA_Achr10P...	Banana	mitochondrion	37.61	40.93
GSMUA_Achr5P22820_001	Banana	mitochondrion	38.89	40.09
Os09t0557400-01	Rice	mitochondrion	37.18	38.84
KXG36169	Sorghum	mitochondrion	38.46	38.14
KRH47379	Soybean	mitochondrion	32.91	37.2
TraesCS5B01G360700.1	Wheat	mitochondrion	36.32	36.02
TraesCS5D01G367500.2	Wheat	mitochondrion	35.9	35.44
Os08t0439900-01	Rice	mitochondrion	34.19	34.33
TraesCS2B01G542100.1	Wheat	mitochondrion	32.48	34.23
TraesCS2A01G514500.1	Wheat	mitochondrion	32.48	33.78
EES15053	Sorghum	mitochondrion	32.48	32.9
Zm00001d032163_P001	Maize	mitochondrion	31.62	32.17
TraesCS2D01G516100.1	Wheat	mitochondrion	31.2	31.2
TraesCS5A01G358200.1	Wheat	mitochondrion	34.62	30.22
KRH73081	Soybean	mitochondrion	26.07	24.11
KRH00042	Soybean	nucleus	26.07	24.02
KRH49169	Soybean	endoplasmic reticulum	25.21	23.32
KRH15056	Soybean	mitochondrion	24.36	22.53
HORVU2Hr1G113990.2	Barley	plastid	17.52	22.04
HORVU5Hr1G088460.2	Barley	mitochondrion	25.64	21.82

Protein Annotations

EntrezGene:100786969	Gene3D:3.10.280.10	MapMan:35.2	EMBL:ACUP02010720	EnsemblPlantsGene:GLYMA_17G216700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	UniProt:I1MWY2
InterPro:IPR036561	ProteinID:KRH05266.1	EnsemblPlants:KRH05267	ProteinID:KRH05267	ProteinID:KRH05267.1	ProteinID:KRH05268.1
InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	SUPFAM:SSF54529
UniParc:UPI000233E0C0	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:36510062..36519347

Molecular Weight (calculated)

26940.1 Da

IEP (calculated)

5.235

GRAVY (calculated)

-0.430

Length

234 amino acids

Sequence
(BLAST)

001: MASSLIRTLQ RASTSLIRTP RVSSACFATS RVGARTYAAE PEPATKSPFD SNIIRILRNE IEYQEEYAPP HQPETQFNSF TVEERRGEQV VTIKGKFGEF
101: EDVKIEATMF DWCEHVPACG DDSSGVNMRL HLSLIVDIAK GDGDSELEFV CSAWPDCLNV EKVYMLRRGR MAARPYVGPD FRDLKAKVQE KFYEYLDVRG
201: VNNELAVFLH EYMMNKDRIE LLRWMDSLKS FMER

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.