CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47379	Soybean	mitochondrion	77.73	85.99
VIT_09s0002g09050.t01	Wine grape	cytosol	47.16	55.96
PGSC0003DMT400036809	Potato	mitochondrion	55.46	55.22
Solyc03g117080.2.1	Tomato	mitochondrion	54.15	53.91
AT1G80720.2	Thale cress	mitochondrion	54.59	51.65
CDY33373	Canola	mitochondrion	54.59	51.44
CDY35045	Canola	mitochondrion	54.15	51.24
Bra026096.1-P	Field mustard	mitochondrion	54.15	51.24
AT1G15870.1	Thale cress	mitochondrion	53.28	50.41
CDY39948	Canola	mitochondrion	52.84	50.0
CDX87337	Canola	mitochondrion	51.53	48.76
Bra035158.1-P	Field mustard	mitochondrion	51.53	48.76
KRH05267	Soybean	mitochondrion	41.05	40.17
KRH15786	Soybean	mitochondrion	41.05	39.66
KRH73081	Soybean	mitochondrion	31.44	28.46
KRH15056	Soybean	mitochondrion	28.82	26.09
KRH49169	Soybean	endoplasmic reticulum	27.95	25.3
KRH00042	Soybean	nucleus	27.95	25.2

Protein Annotations

EntrezGene:100797340	Gene3D:3.10.280.10	MapMan:35.1	EMBL:ACUP02004936	EnsemblPlantsGene:GLYMA_08G217000	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	UniProt:I1KVJ8
InterPro:IPR036561	EnsemblPlants:KRH44530	ProteinID:KRH44530	ProteinID:KRH44530.1	InterPro:MAM33	InterPro:MAM33_sf
PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16	SUPFAM:SSF54529	UniParc:UPI0002338F89	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:17613797..17615566

Molecular Weight (calculated)

26513.0 Da

IEP (calculated)

6.532

GRAVY (calculated)

-0.413

Length

229 amino acids

Sequence
(BLAST)

001: MARLFRSLRK TLTLTLTLTH QFQHQPCISR RSYISDMRKS AFEGNILRLL RNEIQYELQS SPPNNPVTKF NSFIVDGRAG ERWITLKRQY ADEDIKLEVT
101: MFDGAVPAPT PTPNGGVVNS DEMQMHITVI VNISKGEGRV LEIMCSAWPD SIEIKRLFIR ANEKIIAEPY AGPEFTELDD ELQDKLYDFL EVRGINDELA
201: GFLHQYMKNK DKVELIGWME RVKSFIERK

Best Arabidopsis Sequence Match ( AT1G15870.1 )
(BLAST)

001: MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI
101: SLRRKFGEKE DIKIEATMFD GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP NAYIGPEFQE MEDELQDSVY
201: RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE QK

Arabidopsis Description

At1g15870/F7H2_19 [Source:UniProtKB/TrEMBL;Acc:Q9LMP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.