Factsheet for VIT_09s0002g09050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036809	Potato	mitochondrion	63.21	53.04
Solyc03g117080.2.1	Tomato	mitochondrion	63.21	53.04
KRH44530	Soybean	mitochondrion	55.96	47.16
AT1G15870.1	Thale cress	mitochondrion	55.44	44.21
KRH47379	Soybean	mitochondrion	47.15	43.96
AT1G80720.2	Thale cress	mitochondrion	54.4	43.39
CDX87337	Canola	mitochondrion	54.4	43.39
CDY35045	Canola	mitochondrion	54.4	43.39
Bra026096.1-P	Field mustard	mitochondrion	53.89	42.98
Bra035158.1-P	Field mustard	mitochondrion	53.89	42.98
CDY33373	Canola	mitochondrion	53.89	42.8
CDY39948	Canola	mitochondrion	53.37	42.56
VIT_04s0008g05940.t01	Wine grape	mitochondrion	52.33	40.4
VIT_13s0019g02350.t01	Wine grape	mitochondrion	30.57	23.32

Protein Annotations

EntrezGene:100266231	wikigene:100266231	Gene3D:3.10.280.10	MapMan:35.2	ProteinID:CBI36479	ProteinID:CBI36479.3
UniProt:D7TZG5	EMBL:FN596494	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	EntrezGene:LOC100266231	wikigene:LOC100266231	InterPro:MAM33
InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16	SUPFAM:SSF54529	UniParc:UPI0001BE46CA
ArrayExpress:VIT_09s0002g09050	EnsemblPlantsGene:VIT_09s0002g09050	EnsemblPlants:VIT_09s0002g09050.t01	RefSeq:XP_002274018	RefSeq:XP_002274018.1	SEG:seg

Description

No Description!

Coordinates

chr9:+:10606700..10608671

Molecular Weight (calculated)

22548.0 Da

IEP (calculated)

4.570

GRAVY (calculated)

-0.442

Length

193 amino acids

Sequence
(BLAST)

001: MRKSAFEGNI LRLLRSEIEY ELEHFTPKEL VVEYDSFVVE ERPGEQWIRL KKKFGEKEEI KIEVTMFDGS IPVEKSPDGI RIGQEVELHI TLIVNISKGE
101: GSDVLEFVCS AWPQSVEIVN VLVHGKDGRP NQLYMSPKFK DLDDELQESL YEFLETRGID DDLAIFVHEY MKNKDKTEFI RWMGTVKSFI EQK

Best Arabidopsis Sequence Match ( AT1G15870.1 )
(BLAST)

001: MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI
101: SLRRKFGEKE DIKIEATMFD GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP NAYIGPEFQE MEDELQDSVY
201: RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE QK

Arabidopsis Description

At1g15870/F7H2_19 [Source:UniProtKB/TrEMBL;Acc:Q9LMP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.