Factsheet for Bra035158.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39948	Canola	mitochondrion	97.11	97.11
CDX87337	Canola	mitochondrion	95.87	95.87
AT1G80720.2	Thale cress	mitochondrion	80.99	80.99
Bra026096.1-P	Field mustard	mitochondrion	64.88	64.88
VIT_09s0002g09050.t01	Wine grape	cytosol	42.98	53.89
KRH44530	Soybean	mitochondrion	48.76	51.53
KRH47379	Soybean	mitochondrion	42.15	49.28
PGSC0003DMT400036809	Potato	mitochondrion	46.69	49.13
Solyc03g117080.2.1	Tomato	mitochondrion	46.28	48.7
Bra023971.1-P	Field mustard	plastid	35.95	34.66
Bra029081.1-P	Field mustard	plastid	26.03	27.51
Bra005705.1-P	Field mustard	mitochondrion, plastid	28.93	27.03
Bra005013.1-P	Field mustard	mitochondrion	27.69	27.02
Bra014733.1-P	Field mustard	mitochondrion	26.03	24.32
Bra029083.1-P	Field mustard	mitochondrion	19.01	24.21
Bra029051.1-P	Field mustard	plastid	25.62	23.66
Bra009157.1-P	Field mustard	mitochondrion	23.55	22.71
Bra029050.1-P	Field mustard	plastid	22.73	22.36
Bra005873.1-P	Field mustard	mitochondrion	23.97	22.22
Bra029082.1-P	Field mustard	plastid	11.16	16.46

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EnsemblPlantsGene:Bra035158	EnsemblPlants:Bra035158.1	EnsemblPlants:Bra035158.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561
UniProt:M4F261	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF16
SUPFAM:SSF54529	UniParc:UPI0002541E26	:	:	:	:

Description

AT1G80720 (E=2e-092) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA07:-:22404377..22405329

Molecular Weight (calculated)

27740.8 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.536

Length

242 amino acids

Sequence
(BLAST)

001: MARYLRCLRT SVFSDSSPSI AYRNPKIGLP TVQNRNFLIG GRCLSSGSYV SEMQKSAFQG NICRLIRNEI DYELNHSPPL QSPSSYGPFT VEERHGEQWI
101: SLKRKYGEKE DIKVEATMFD RSVPTSKSTR TEPEFILHIT FVVNISKGIS GESLEIVCSA WPDNIEISKL CIRKGTNSSP SSYGGPEFEE LDDELQDALY
201: QFLEERGISD ELAVFLHRYM KNKSKFEYVR WMESVKSYVE KN

Best Arabidopsis Sequence Match ( AT1G80720.2 )
(BLAST)

001: MARFVRCLRR TLFSNSSPSI AHRSPRIGLP TNLNPKILIS RRCLSSGSYV SEMQKSAFQG NILRLIRNEI EYELDHSPPL QPPNSFGPFT VDERPGEQWI
101: SLKRNFGDKE DIKIEATMFD RSVPTSKSTK TEPEYILHIT FIVNISKAGA TEALEIMCSA WPDTIEISKL CIRRGINTSP SSYGGPEFEE LDDQLQDALY
201: QFLEERGISD ELAVFLHRYM KNKGKAEYVR WMESVKSYVE QK

Arabidopsis Description

Mitochondrial glycoprotein family protein [Source:TAIR;Acc:AT1G80720]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.