Factsheet for Bra009157.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70103	Canola	mitochondrion	98.01	96.47
Bra005873.1-P	Field mustard	mitochondrion	88.84	85.44
AT5G05990.1	Thale cress	mitochondrion	80.08	77.61
HORVU0Hr1G006190.1	Barley	cytosol	37.85	53.37
HORVU3Hr1G011460.1	Barley	mitochondrion	48.61	48.03
TraesCS3B01G071700.1	Wheat	mitochondrion	48.21	46.72
TraesCS3A01G059200.1	Wheat	mitochondrion	48.21	46.72
VIT_13s0019g02350.t01	Wine grape	mitochondrion	45.82	45.45
GSMUA_Achr4P16890_001	Banana	mitochondrion	47.41	45.25
Os01t0143300-01	Rice	mitochondrion	47.41	45.08
Zm00001d039883_P001	Maize	mitochondrion	45.02	44.66
EES00334	Sorghum	mitochondrion, plastid	47.01	44.36
Solyc03g079930.2.1	Tomato	plastid	45.02	43.8
KRH73081	Soybean	mitochondrion	43.82	43.48
Bra005013.1-P	Field mustard	mitochondrion	42.63	43.15
KRH15056	Soybean	mitochondrion	42.63	42.29
Bra014733.1-P	Field mustard	mitochondrion	43.43	42.08
PGSC0003DMT400055876	Potato	mitochondrion, plastid	42.23	41.57
HORVU3Hr1G011490.1	Barley	cytosol	20.32	38.35
HORVU3Hr1G085260.1	Barley	cytosol	23.9	37.97
Os01t0143700-00	Rice	mitochondrion	37.85	36.68
Bra005705.1-P	Field mustard	mitochondrion, plastid	36.26	35.14
EES00333	Sorghum	plastid	33.47	30.88
Zm00001d008610_P001	Maize	plastid	33.07	30.29
Os01t0143800-01	Rice	plastid	33.07	30.18
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	33.47	30.0
Bra029083.1-P	Field mustard	mitochondrion	22.71	30.0
Bra029081.1-P	Field mustard	plastid	27.09	29.69
TraesCS3A01G059600.1	Wheat	plastid	31.87	29.41
TraesCS1D01G281100.1	Wheat	mitochondrion	29.08	28.97
TraesCS3B01G072200.1	Wheat	plastid	30.68	28.52
HORVU1Hr1G072660.2	Barley	mitochondrion	29.08	28.52
Bra029051.1-P	Field mustard	plastid	29.48	28.24
HORVU3Hr1G011560.1	Barley	plastid	31.87	27.78
TraesCS3D01G059900.1	Wheat	plastid	29.88	27.78
Bra029050.1-P	Field mustard	plastid	26.69	27.24
TraesCS3B01G072000.1	Wheat	mitochondrion	29.08	27.04
EES19636	Sorghum	mitochondrion	27.49	26.95
TraesCS1B01G291000.1	Wheat	mitochondrion	27.89	26.92
TraesCS3D01G059700.1	Wheat	mitochondrion	29.08	25.98
TraesCS3D01G059800.1	Wheat	mitochondrion	29.88	25.51
Os05t0456000-01	Rice	mitochondrion	25.9	25.19
Bra026096.1-P	Field mustard	mitochondrion	23.9	24.79
TraesCS3B01G071900.1	Wheat	mitochondrion	29.48	23.87
Bra035158.1-P	Field mustard	mitochondrion	22.71	23.55
TraesCS3D01G059500.1	Wheat	mitochondrion	28.69	23.23
TraesCS3D01G059600.1	Wheat	mitochondrion	26.29	22.76
Bra023971.1-P	Field mustard	plastid	21.91	21.91
HORVU3Hr1G011580.1	Barley	mitochondrion	13.15	20.12
Bra029082.1-P	Field mustard	plastid	11.95	18.29
HORVU3Hr1G011510.1	Barley	plastid	27.49	17.04

Protein Annotations

EnsemblPlants:Bra009157.1	EnsemblPlants:Bra009157.1-P	EnsemblPlantsGene:Bra009157	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI0002544E1E	UniProt:M4CY60	MapMan:35.1	:	:	:

Description

AT5G05990 (E=3e-099) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA10:-:15460459..15461359

Molecular Weight (calculated)

28531.9 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.655

Length

251 amino acids

Sequence
(BLAST)

001: MASLVRRAAS RLVGSCGKSR FSVNSLGAHG RMRYLTPSIS RNNPFSTSAR KKASSNDPLL RVIETEIGFA EQADDYDRVE ETPNGFPFKM EDKPGSKVVT
101: LTRDYQGESV VVEVHMTNLV TGEKGDDEES EEEEEHEDKP DKPKQSNVPL LVTLSKKTGP SLEFRCTAFP DKIVIKDMWV TFPDDPSKDE LAYEGPSFRV
201: LDEKLRKAFH RYIEIRGITP GMINFLHEYM INKDSKEHLL WLKTLKNFVK S

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.