Factsheet for HORVU3Hr1G011460.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G02050.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G006190.1	Barley	cytosol	70.08	100.0
TraesCS3A01G059200.1	Wheat	mitochondrion	93.7	91.89
TraesCS3B01G071700.1	Wheat	mitochondrion	93.7	91.89
HORVU3Hr1G085260.1	Barley	cytosol	49.21	79.11
Os01t0143300-01	Rice	mitochondrion	74.8	71.97
EES00334	Sorghum	mitochondrion, plastid	71.65	68.42
Zm00001d039883_P001	Maize	mitochondrion	64.57	64.82
GSMUA_Achr4P16890_001	Banana	mitochondrion	58.66	56.65
VIT_13s0019g02350.t01	Wine grape	mitochondrion	53.15	53.36
Solyc03g079930.2.1	Tomato	plastid	51.57	50.78
PGSC0003DMT400055876	Potato	mitochondrion, plastid	50.0	49.8
Os01t0143700-00	Rice	mitochondrion	50.0	49.03
CDX70103	Canola	mitochondrion	48.82	48.63
Bra009157.1-P	Field mustard	mitochondrion	48.03	48.61
KRH73081	Soybean	mitochondrion	47.24	47.43
KRH15056	Soybean	mitochondrion	47.24	47.43
CDX98894	Canola	mitochondrion	48.03	47.29
Bra005873.1-P	Field mustard	mitochondrion	47.24	45.98
CDY11346	Canola	mitochondrion	47.24	45.98
AT5G05990.1	Thale cress	mitochondrion	46.06	45.17
CDX80981	Canola	mitochondrion	45.28	44.4
KRH49169	Soybean	endoplasmic reticulum	43.7	43.87
KRH00042	Soybean	nucleus	43.7	43.7
Bra005013.1-P	Field mustard	mitochondrion	42.52	43.55
AT3G55605.1	Thale cress	mitochondrion	43.7	43.02
CDX74831	Canola	mitochondrion	42.13	42.97
AT2G39795.1	Thale cress	mitochondrion	42.13	42.8
CDY20481	Canola	mitochondrion	41.73	42.74
HORVU3Hr1G011490.1	Barley	cytosol	22.05	42.11
CDX76083	Canola	mitochondrion	41.34	40.38
CDY65769	Canola	mitochondrion, plastid	40.94	40.15
Bra014733.1-P	Field mustard	mitochondrion	40.94	40.15
CDX80800	Canola	mitochondrion	38.98	38.22
CDY55117	Canola	mitochondrion, plastid	38.98	38.22
Bra005705.1-P	Field mustard	mitochondrion, plastid	38.98	38.22
CDY38743	Canola	cytosol	22.83	37.91
Solyc09g011250.2.1	Tomato	mitochondrion	37.01	37.45
AT5G02050.1	Thale cress	mitochondrion, plastid	38.98	37.08
PGSC0003DMT400022948	Potato	mitochondrion	36.61	37.05
HORVU1Hr1G072660.2	Barley	mitochondrion	35.83	35.55
AT2G39790.1	Thale cress	mitochondrion, plastid	33.07	35.0
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	38.19	34.64
Bra029081.1-P	Field mustard	plastid	29.92	33.19
Bra029083.1-P	Field mustard	mitochondrion	24.8	33.16
CDY47064	Canola	plastid	31.5	32.52
HORVU7Hr1G046980.1	Barley	mitochondrion	33.46	32.44
HORVU3Hr1G011560.1	Barley	plastid	36.22	31.94
CDY47065	Canola	plastid	17.72	31.91
CDY38740	Canola	plastid	30.32	31.82
Bra029050.1-P	Field mustard	plastid	30.32	31.3
CDY43064	Canola	plastid	30.32	31.3
CDY70180	Canola	plastid	30.71	30.12
CDY70179	Canola	plastid	29.13	30.08
Bra029051.1-P	Field mustard	plastid	29.53	28.63
CDY43065	Canola	plastid	29.53	28.63
HORVU3Hr1G011580.1	Barley	mitochondrion	16.14	25.0
HORVU3Hr1G011510.1	Barley	plastid	35.43	22.22
Bra029082.1-P	Field mustard	plastid	12.6	19.51
HORVU2Hr1G113990.2	Barley	plastid	11.42	15.59
HORVU5Hr1G088460.2	Barley	mitochondrion	13.78	12.73

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	UniProt:A0A287K3K6	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	EnsemblPlantsGene:HORVU3Hr1G011460	EnsemblPlants:HORVU3Hr1G011460.1	InterPro:IPR036561
InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	SUPFAM:SSF54529
UniParc:UPI000B4824CD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:24775252..24778596

Molecular Weight (calculated)

28431.2 Da

IEP (calculated)

4.397

GRAVY (calculated)

-0.609

Length

254 amino acids

Sequence
(BLAST)

001: AAARRAASSS LPLLRASASR GAATRGQALL RPLAAAAARP MPFSSATALK PSSDDELLRV VKAEIKFAED CDDHDRVEEV PDSFPFKITD KKGFNDITLT
101: RTYQGEKIEV LVSMPNLVTG DEPEHDQDED DKEKDDDQDD SEKPPKSTLP LTVTITKSSS GPSLEFTCTA YPDEILIDTL SVKQPSANLE EEDIAYEGPD
201: FNDLDENLQR AFHKYLELRG ITPMTTNFLH EYMINKDSRE YLFWLNKLKD FVKL

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.