CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70103	Canola	mitochondrion	94.96	96.08
CDY11346	Canola	mitochondrion	87.98	86.97
CDX80981	Canola	mitochondrion	86.05	85.71
AT5G05990.1	Thale cress	mitochondrion	78.68	78.38
HORVU0Hr1G006190.1	Barley	cytosol	37.6	54.49
HORVU3Hr1G011460.1	Barley	mitochondrion	47.29	48.03
TraesCS3B01G071700.1	Wheat	mitochondrion	46.9	46.72
TraesCS3A01G059200.1	Wheat	mitochondrion	46.9	46.72
Os01t0143300-01	Rice	mitochondrion	46.51	45.45
VIT_13s0019g02350.t01	Wine grape	mitochondrion	44.19	45.06
GSMUA_Achr4P16890_001	Banana	mitochondrion	45.35	44.49
Zm00001d039883_P001	Maize	mitochondrion	43.41	44.27
Solyc03g079930.2.1	Tomato	plastid	44.19	44.19
EES00334	Sorghum	mitochondrion, plastid	45.35	43.98
KRH73081	Soybean	mitochondrion	42.64	43.48
CDY20481	Canola	mitochondrion	41.47	43.15
KRH15056	Soybean	mitochondrion	41.47	42.29
PGSC0003DMT400055876	Potato	mitochondrion, plastid	41.47	41.96
CDX74831	Canola	mitochondrion	40.31	41.77
CDX76083	Canola	mitochondrion	41.86	41.54
CDY65769	Canola	mitochondrion, plastid	41.09	40.93
HORVU3Hr1G085260.1	Barley	cytosol	24.03	39.24
HORVU3Hr1G011490.1	Barley	cytosol	19.77	38.35
Os01t0143700-00	Rice	mitochondrion	36.43	36.29
CDY55117	Canola	mitochondrion, plastid	35.66	35.52
CDX80800	Canola	mitochondrion	35.66	35.52
CDY38743	Canola	cytosol	20.93	35.29
Os01t0143800-01	Rice	plastid	34.11	32.0
EES00333	Sorghum	plastid	33.72	31.99
Zm00001d008610_P001	Maize	plastid	33.33	31.39
CDY70180	Canola	plastid	31.01	30.89
CDY38740	Canola	plastid	28.68	30.58
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	32.95	30.36
TraesCS3A01G059600.1	Wheat	plastid	31.78	30.15
CDY47064	Canola	plastid	28.68	30.08
CDY43065	Canola	plastid	29.84	29.39
TraesCS3B01G072200.1	Wheat	plastid	30.62	29.26
TraesCS1D01G281100.1	Wheat	mitochondrion	28.29	28.97
TraesCS3D01G059900.1	Wheat	plastid	29.84	28.52
HORVU1Hr1G072660.2	Barley	mitochondrion	28.29	28.52
HORVU3Hr1G011560.1	Barley	plastid	31.4	28.12
CDY43064	Canola	plastid	26.74	28.05
CDY70179	Canola	plastid	26.36	27.64
TraesCS3B01G072000.1	Wheat	mitochondrion	28.68	27.41
EES19636	Sorghum	mitochondrion	27.13	27.34
CDY47065	Canola	plastid	14.73	26.95
TraesCS1B01G291000.1	Wheat	mitochondrion	27.13	26.92
CDX68804	Canola	cytosol	12.4	26.89
TraesCS3D01G059700.1	Wheat	mitochondrion	28.68	26.33
TraesCS3D01G059800.1	Wheat	mitochondrion	29.46	25.85
Os05t0456000-01	Rice	mitochondrion	25.58	25.58
CDY39948	Canola	mitochondrion	22.87	24.38
CDY33373	Canola	mitochondrion	22.87	24.28
TraesCS3B01G071900.1	Wheat	mitochondrion	29.07	24.19
TraesCS3D01G059500.1	Wheat	mitochondrion	29.07	24.19
CDX87337	Canola	mitochondrion	22.48	23.97
CDY35045	Canola	mitochondrion	22.48	23.97
TraesCS3D01G059600.1	Wheat	mitochondrion	25.58	22.76
CDY13466	Canola	mitochondrion	21.32	22.45
CDX72338	Canola	plastid	21.32	22.0
HORVU3Hr1G011580.1	Barley	mitochondrion	13.18	20.73
HORVU3Hr1G011510.1	Barley	plastid	26.74	17.04

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	GO:A0A078EDK5	EnsemblPlants:CDX98894	ProteinID:CDX98894	ProteinID:CDX98894.1
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	EnsemblPlantsGene:GSBRNA2T00106998001	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330
PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	SUPFAM:SSF54529	UniParc:UPI0004EAD2E5	SEG:seg	:

Description

BnaC09g49410D

Coordinates

chrLK031907:-:469589..470511

Molecular Weight (calculated)

29325.7 Da

IEP (calculated)

5.486

GRAVY (calculated)

-0.619

Length

258 amino acids

Sequence
(BLAST)

001: MASLVRGAAS RLVGSCSKSR FFVNSLGAHG RLRYLTPSIS RSNLFSTSAR KKASSNDPLL RVIETEIGFA EQADDYDRVE ETPSGFPFKM EDKPGSKVVT
101: LTRDYQGESV VVEVHMTNLV TGDKGDDEES DEESEEEEEH EDKPEKPKQS NVPLLVTLSK KTGPSLEFRC TAFPDKIVIK DMWVTFPDDP SKDELAYEGP
201: SFRVLDEKLR KAFHRYIEIR GITPGMINFL HEYMINKDSK EHLLWLKTLK NFVKSLRE

Best Arabidopsis Sequence Match ( AT5G05990.1 )
(BLAST)

001: MATLVRRAAS RFVGSYWKNR SFVYSLLDQS ASGRRRHLTP SVDRNVPFTT STKKRASPTD PLLRIIEEEI GYAEKADDYH RVEETPSGFP FEMEDKPGGK
101: IVTLTREYEG ETVKVEVHMT NLVTGDKEDD EDDEEEAENE EDEDEDKPLK PKQSNVPLLV TLSKKTGPSL EFRCTAFPDR IAIKDMWVTF PDDPSKDELA
201: YEGPSFRVLD EKLRKAFHRY IEIRGIKPSM INFLHEYMIN KDSREHLLWL KSLKNFVKY

Arabidopsis Description

AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.