CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13466	Canola	mitochondrion	91.6	93.47
AT4G31930.1	Thale cress	mitochondrion	75.6	80.77
CDX68804	Canola	cytosol	38.0	79.83
Solyc06g065800.2.1	Tomato	mitochondrion	47.6	50.42
PGSC0003DMT400067216	Potato	mitochondrion	47.2	50.0
KRH05267	Soybean	mitochondrion	46.8	50.0
KRH15786	Soybean	mitochondrion	46.0	48.52
VIT_04s0008g05940.t01	Wine grape	mitochondrion	43.6	43.6
GSMUA_Achr10P...	Banana	mitochondrion	34.8	40.47
GSMUA_Achr5P22820_001	Banana	mitochondrion	35.2	38.77
CDX87337	Canola	mitochondrion	35.6	36.78
CDY39948	Canola	mitochondrion	34.4	35.54
Os09t0557400-01	Rice	mitochondrion	31.2	34.82
KXG36169	Sorghum	mitochondrion	31.6	33.47
TraesCS5B01G360700.1	Wheat	mitochondrion	30.4	32.2
TraesCS2B01G542100.1	Wheat	mitochondrion	28.4	31.98
CDY33373	Canola	mitochondrion	30.8	31.69
EES15053	Sorghum	mitochondrion	29.2	31.6
TraesCS2A01G514500.1	Wheat	mitochondrion	28.0	31.11
CDY35045	Canola	mitochondrion	30.0	30.99
Os08t0439900-01	Rice	mitochondrion	28.8	30.9
TraesCS5D01G367500.2	Wheat	mitochondrion	29.2	30.8
Zm00001d032163_P001	Maize	mitochondrion	27.6	30.0
TraesCS2D01G516100.1	Wheat	mitochondrion	27.6	29.49
TraesCS5A01G358200.1	Wheat	mitochondrion	30.4	28.36
CDY38743	Canola	cytosol	16.4	26.8
CDY47064	Canola	plastid	24.4	24.8
CDY38740	Canola	plastid	24.0	24.79
CDX80800	Canola	mitochondrion	23.6	22.78
CDY70180	Canola	plastid	22.8	22.01
CDY55117	Canola	mitochondrion, plastid	22.8	22.01
CDY47065	Canola	plastid	12.4	21.99
CDX70103	Canola	mitochondrion	22.4	21.96
CDY43065	Canola	plastid	22.8	21.76
CDX98894	Canola	mitochondrion	22.0	21.32
CDX80981	Canola	mitochondrion	22.0	21.24
CDY11346	Canola	mitochondrion	22.0	21.07
CDY43064	Canola	plastid	20.0	20.33
CDY70179	Canola	plastid	19.6	19.92
CDY20481	Canola	mitochondrion	19.6	19.76
CDY65769	Canola	mitochondrion, plastid	20.4	19.69
HORVU5Hr1G088460.2	Barley	mitochondrion	21.6	19.64
CDX76083	Canola	mitochondrion	20.4	19.62
HORVU2Hr1G113990.2	Barley	plastid	14.4	19.35
CDX74831	Canola	mitochondrion	19.2	19.28

Protein Annotations

EnsemblPlants:CDX72338	EnsemblPlantsGene:GSBRNA2T00099829001	Gene3D:3.10.280.10	GO:A0A078CBE5	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	PFAM:PF02330	ProteinID:CDX72338	ProteinID:CDX72338.1
SUPFAM:SSF54529	UniParc:UPI0004EDBDA3	MapMan:35.2	:	:	:

Description

BnaC07g43600D

Coordinates

chrLK031796:-:759466..760785

Molecular Weight (calculated)

28667.7 Da

IEP (calculated)

8.716

GRAVY (calculated)

-0.338

Length

250 amino acids

Sequence
(BLAST)

001: MSSTATMKTS MALLLRTLSK ARVFHPHSPS LSCARCNPLL PTPQSRDITT SRRSFAAIAP ANSPFRSNLL RIIRNEIDYQ SEYAPPHQPA TEFKSFSVED
101: RPGEQCIVMK GKFGEDETIK MEATMFDGFM TVPRTGLDAS GRDVRLHVSL LVDISKADGS EDMEFLCSVW PNRIEIQNLY MLRRDKITGQ PYLGPKFGSL
201: KYDFQTAIKE FLRVRGIDSE LCFFFHEYMM NKDRIELIQW LRKLDSFMAK

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.