CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05267	Soybean	mitochondrion	90.72	91.88
CDX68804	Canola	cytosol	24.89	49.58
AT4G31930.1	Thale cress	mitochondrion	48.95	49.57
PGSC0003DMT400067216	Potato	mitochondrion	48.52	48.73
Solyc06g065800.2.1	Tomato	mitochondrion	47.68	47.88
CDY13466	Canola	mitochondrion	48.52	46.94
VIT_04s0008g05940.t01	Wine grape	mitochondrion	49.37	46.8
Bra023971.1-P	Field mustard	plastid	48.95	46.22
CDX72338	Canola	plastid	48.52	46.0
KRH44530	Soybean	mitochondrion	39.66	41.05
GSMUA_Achr10P...	Banana	mitochondrion	36.71	40.47
GSMUA_Achr5P22820_001	Banana	mitochondrion	37.97	39.65
Os09t0557400-01	Rice	mitochondrion	35.87	37.95
KRH47379	Soybean	mitochondrion	32.91	37.68
KXG36169	Sorghum	mitochondrion	36.71	36.86
TraesCS5B01G360700.1	Wheat	mitochondrion	36.29	36.44
TraesCS5D01G367500.2	Wheat	mitochondrion	35.87	35.87
TraesCS2B01G542100.1	Wheat	mitochondrion	32.49	34.68
Os08t0439900-01	Rice	mitochondrion	33.76	34.33
TraesCS2A01G514500.1	Wheat	mitochondrion	31.65	33.33
EES15053	Sorghum	mitochondrion	30.8	31.6
Zm00001d032163_P001	Maize	mitochondrion	30.38	31.3
TraesCS2D01G516100.1	Wheat	mitochondrion	30.38	30.77
TraesCS5A01G358200.1	Wheat	mitochondrion	34.6	30.6
KRH00042	Soybean	nucleus	26.16	24.41
KRH73081	Soybean	mitochondrion	25.32	23.72
KRH49169	Soybean	endoplasmic reticulum	25.32	23.72
HORVU5Hr1G088460.2	Barley	mitochondrion	26.16	22.55
KRH15056	Soybean	mitochondrion	23.63	22.13
HORVU2Hr1G113990.2	Barley	plastid	17.3	22.04

Protein Annotations

EntrezGene:100810099	Gene3D:3.10.280.10	MapMan:35.2	EMBL:ACUP02008653	EnsemblPlantsGene:GLYMA_14G111200	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	UniProt:I1M9F2
InterPro:IPR036561	ProteinID:KRH15785.1	EnsemblPlants:KRH15786	ProteinID:KRH15786	ProteinID:KRH15786.1	InterPro:MAM33
InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826	PANTHER:PTHR10826:SF14	SUPFAM:SSF54529	UniParc:UPI000233BC92

Description

hypothetical protein

Coordinates

chr14:-:12601017..12603432

Molecular Weight (calculated)

27117.3 Da

IEP (calculated)

5.243

GRAVY (calculated)

-0.450

Length

237 amino acids

Sequence
(BLAST)

001: MTSSLIRTLQ RASASLIRTS RPLSPHAATT RVGARTYAAE PKPEPATKSP FDSNIIRILR NEIEYQEEYA PPHQPETKFN SFTVEELRGE QVVTIKGKFG
101: ECEDIKIEAT MFDGCEHVPA CGDDSSGVNL RLHLSLIVDI AKGEEGDSEL EFVCSAWPDC LNVEKVYMLR RSRMAARPYV GPDFRDLKAK VQETFYEYLD
201: VRGVNNELAI FLHEYMMNKD RIELLRWMDS LKSFMER

Best Arabidopsis Sequence Match ( AT4G31930.1 )
(BLAST)

001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ

Arabidopsis Description

AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.