Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13466 | Canola | mitochondrion | 82.35 | 40.0 |
| AT4G31930.1 | Thale cress | mitochondrion | 78.15 | 39.74 |
| Bra023971.1-P | Field mustard | plastid | 82.35 | 39.04 |
| CDX72338 | Canola | plastid | 79.83 | 38.0 |
| Solyc06g065800.2.1 | Tomato | mitochondrion | 50.42 | 25.42 |
| KRH05267 | Soybean | mitochondrion | 49.58 | 25.21 |
| PGSC0003DMT400067216 | Potato | mitochondrion | 49.58 | 25.0 |
| KRH15786 | Soybean | mitochondrion | 49.58 | 24.89 |
| VIT_04s0008g05940.t01 | Wine grape | mitochondrion | 47.9 | 22.8 |
| GSMUA_Achr5P22820_001 | Banana | mitochondrion | 42.02 | 22.03 |
| CDY33373 | Canola | mitochondrion | 39.5 | 19.34 |
| GSMUA_Achr10P... | Banana | mitochondrion | 34.45 | 19.07 |
| CDY35045 | Canola | mitochondrion | 38.66 | 19.01 |
| CDY39948 | Canola | mitochondrion | 37.82 | 18.59 |
| CDX87337 | Canola | mitochondrion | 37.82 | 18.59 |
| TraesCS2B01G542100.1 | Wheat | mitochondrion | 34.45 | 18.47 |
| EES15053 | Sorghum | mitochondrion | 35.29 | 18.18 |
| Os08t0439900-01 | Rice | mitochondrion | 35.29 | 18.03 |
| TraesCS2D01G516100.1 | Wheat | mitochondrion | 35.29 | 17.95 |
| Zm00001d032163_P001 | Maize | mitochondrion | 34.45 | 17.83 |
| TraesCS2A01G514500.1 | Wheat | mitochondrion | 33.61 | 17.78 |
| CDY38743 | Canola | cytosol | 21.85 | 16.99 |
| KXG36169 | Sorghum | mitochondrion | 33.61 | 16.95 |
| Os09t0557400-01 | Rice | mitochondrion | 31.09 | 16.52 |
| HORVU2Hr1G113990.2 | Barley | plastid | 24.37 | 15.59 |
| TraesCS5B01G360700.1 | Wheat | mitochondrion | 30.25 | 15.25 |
| TraesCS5D01G367500.2 | Wheat | mitochondrion | 30.25 | 15.19 |
| TraesCS5A01G358200.1 | Wheat | mitochondrion | 30.25 | 13.43 |
| CDX70103 | Canola | mitochondrion | 27.73 | 12.94 |
| CDY65769 | Canola | mitochondrion, plastid | 27.73 | 12.74 |
| CDX76083 | Canola | mitochondrion | 27.73 | 12.69 |
| CDY43065 | Canola | plastid | 27.73 | 12.6 |
| CDX98894 | Canola | mitochondrion | 26.89 | 12.4 |
| CDY38740 | Canola | plastid | 25.21 | 12.4 |
| CDY70180 | Canola | plastid | 26.89 | 12.36 |
| CDX80981 | Canola | mitochondrion | 26.89 | 12.36 |
| CDY11346 | Canola | mitochondrion | 26.89 | 12.26 |
| CDY47064 | Canola | plastid | 25.21 | 12.2 |
| CDX80800 | Canola | mitochondrion | 25.21 | 11.58 |
| CDY55117 | Canola | mitochondrion, plastid | 25.21 | 11.58 |
| CDY47065 | Canola | plastid | 13.45 | 11.35 |
| CDY20481 | Canola | mitochondrion | 22.69 | 10.89 |
| CDX74831 | Canola | mitochondrion | 22.69 | 10.84 |
| CDY43064 | Canola | plastid | 21.85 | 10.57 |
| CDY70179 | Canola | plastid | 21.01 | 10.16 |
| HORVU5Hr1G088460.2 | Barley | mitochondrion | 15.97 | 6.91 |
Protein Annotations
| EnsemblPlants:CDX68804 | EnsemblPlantsGene:GSBRNA2T00130522001 | Gene3D:3.10.280.10 | GO:A0A078BY32 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 |
| InterPro:MAM33_sf | PANTHER:PTHR10826 | PANTHER:PTHR10826:SF14 | PFAM:PF02330 | ProteinID:CDX68804 | ProteinID:CDX68804.1 |
| SUPFAM:SSF54529 | UniParc:UPI0004EDCA72 | MapMan:35.2 | : | : | : |
Description
BnaC01g06490D
Coordinates
chrLK031789:-:1367182..1367617
Molecular Weight (calculated)
13760.9 Da
IEP (calculated)
5.726
GRAVY (calculated)
-0.020
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATMFDGFM YVLRTGLDAS GSDVRLHISL LVNISKADGN DEMEFLCSVW PNRIEIQNLY MLRSNKVIPK TCMGPSFGLK YDFQTAVKEF LRVRGIYGEL
101: CFFLHEYMMN KDRIELING
101: CFFLHEYMMN KDRIELING
001: MALLLRTLQK SRISPSHSSR TLISWVRCKS LLPNHQSRDV TTSPAKSPFR SNILRIIRNE IEYQSDYAPP HQPATEFKSF SVEDCPGEQC IVMKGKFGED
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ
101: EDIKMEATMF DGFMNVPRAG LDASGHDVRL HISLLVDISK VDGSEEIEFL CSVWPNRIEI RKLYKLRRNK ITGQPYMGPN FGNLKYDFQT AIREFLRVRG
201: IDAELCFFLH EYMMNKDRIE LIQWLRKLNS FISQ
Arabidopsis Description
AT4g31930/F10N7_260 [Source:UniProtKB/TrEMBL;Acc:Q9AST4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.