Factsheet for Os01t0143700-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0758000-01
Os06t0219500-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	Os02t0758000-01	AT4G25200.1	21798944
AT5G02050.1	Os06t0219500-00	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0143300-01	Rice	mitochondrion	57.92	56.82
HORVU0Hr1G006190.1	Barley	cytosol	38.61	56.18
TraesCS3A01G059200.1	Wheat	mitochondrion	51.74	51.74
EES00334	Sorghum	mitochondrion, plastid	51.74	50.38
TraesCS3B01G071700.1	Wheat	mitochondrion	50.19	50.19
HORVU3Hr1G011460.1	Barley	mitochondrion	49.03	50.0
Zm00001d039883_P001	Maize	mitochondrion	47.1	48.22
GSMUA_Achr4P16890_001	Banana	mitochondrion	44.02	43.35
HORVU3Hr1G011490.1	Barley	cytosol	21.62	42.11
Solyc03g079930.2.1	Tomato	plastid	40.15	40.31
VIT_13s0019g02350.t01	Wine grape	mitochondrion	39.0	39.92
HORVU3Hr1G085260.1	Barley	cytosol	24.32	39.87
KRH15056	Soybean	mitochondrion	38.61	39.53
KRH73081	Soybean	mitochondrion	38.22	39.13
PGSC0003DMT400055876	Potato	mitochondrion, plastid	38.22	38.82
AT2G39795.1	Thale cress	mitochondrion	36.68	38.0
Bra009157.1-P	Field mustard	mitochondrion	36.68	37.85
CDX70103	Canola	mitochondrion	37.07	37.65
CDY20481	Canola	mitochondrion	35.91	37.5
AT3G55605.1	Thale cress	mitochondrion	37.07	37.21
Bra005013.1-P	Field mustard	mitochondrion	35.52	37.1
KRH00042	Soybean	nucleus	36.29	37.01
KRH49169	Soybean	endoplasmic reticulum	35.91	36.76
CDY38743	Canola	cytosol	21.62	36.6
CDX74831	Canola	mitochondrion	35.14	36.55
CDX98894	Canola	mitochondrion	36.29	36.43
AT5G02050.1	Thale cress	mitochondrion, plastid	35.91	34.83
AT5G05990.1	Thale cress	mitochondrion	34.75	34.75
Solyc09g011250.2.1	Tomato	mitochondrion	33.59	34.66
PGSC0003DMT400022948	Potato	mitochondrion	33.2	34.26
Bra005873.1-P	Field mustard	mitochondrion	34.36	34.1
CDY11346	Canola	mitochondrion	34.36	34.1
CDX80981	Canola	mitochondrion	33.98	33.98
Bra014733.1-P	Field mustard	mitochondrion	33.59	33.59
CDX80800	Canola	mitochondrion	33.2	33.2
CDX76083	Canola	mitochondrion	33.2	33.08
CDY55117	Canola	mitochondrion, plastid	32.43	32.43
Bra005705.1-P	Field mustard	mitochondrion, plastid	32.43	32.43
TraesCS3B01G072000.1	Wheat	mitochondrion	33.59	32.22
CDY65769	Canola	mitochondrion, plastid	32.05	32.05
Os01t0143800-01	Rice	plastid	33.59	31.64
TraesCS3D01G059800.1	Wheat	mitochondrion	35.91	31.63
Bra029083.1-P	Field mustard	mitochondrion	23.17	31.58
Bra029081.1-P	Field mustard	plastid	27.41	31.0
TraesCS3D01G059700.1	Wheat	mitochondrion	33.2	30.61
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	32.43	30.0
Os05t0456000-01	Rice	mitochondrion	28.96	29.07
AT2G39790.1	Thale cress	mitochondrion, plastid	26.64	28.75
Os06t0326500-01	Rice	mitochondrion	29.73	28.62
CDY47064	Canola	plastid	27.03	28.46
CDY47065	Canola	plastid	15.44	28.37
CDY38740	Canola	plastid	26.25	28.1
Bra029050.1-P	Field mustard	plastid	25.87	27.24
CDY43064	Canola	plastid	25.87	27.24
CDY70179	Canola	plastid	25.48	26.83
TraesCS3B01G071900.1	Wheat	mitochondrion	32.05	26.77
CDY70180	Canola	plastid	26.25	26.25
TraesCS3D01G059500.1	Wheat	mitochondrion	30.89	25.81
CDY43065	Canola	plastid	25.87	25.57
Bra029051.1-P	Field mustard	plastid	25.87	25.57
Os09t0557400-01	Rice	mitochondrion	21.24	24.55
TraesCS3D01G059600.1	Wheat	mitochondrion	26.25	23.45
Os08t0439900-01	Rice	mitochondrion	19.3	21.46
HORVU3Hr1G011580.1	Barley	mitochondrion	13.13	20.73
HORVU3Hr1G011510.1	Barley	plastid	31.66	20.25
Bra029082.1-P	Field mustard	plastid	10.81	17.07

Protein Annotations

Gene3D:3.10.280.10	MapMan:35.1	EntrezGene:4325461	ProteinID:BAB16469.1	ProteinID:BAB40124.1	ProteinID:BAF03913.2
ProteinID:BAS70344.1	ProteinID:EEE53851.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	EnsemblPlantsGene:Os01g0143700
EnsemblPlants:Os01t0143700-00	PFAM:PF02330	PANTHER:PTHR10826	UniProt:Q9FU75	SUPFAM:SSF54529	UniParc:UPI000009E4C0
RefSeq:XP_015646531.1	SEG:seg	:	:	:	:

Description

Similar to Mitochondrial glycoprotein. (Os01t0143700-00)

Coordinates

chr1:-:2372323..2374066

Molecular Weight (calculated)

29119.2 Da

IEP (calculated)

4.248

GRAVY (calculated)

-0.500

Length

259 amino acids

Sequence
(BLAST)

001: MALFAAARRA ATSTLPLLRP LAAAAARPQP RSMPFSSSAP LTKPAFDSEL VRIIDNAIND AEEESDGDQD RAKEIPNNSP FKIFKFFKIN YGEGSNAITL
101: TRTYHGEKIE LQVSMDSLES DDEPEPATAK VKCEKRWTSD ESEYEEIQVP SKSSIPLTVT ISKGDGQILE FSCTAHPEEI VIDTLSLMQP PEDDNNEMIA
201: DEGPDFDDLD ESLQKALNKY LELRGITPMA AKFLQEYMIY KENEEYLLWL RKLKDFVSL

Best Arabidopsis Sequence Match ( AT3G55605.1 )
(BLAST)

001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE

Arabidopsis Description

At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.