Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76083 | Canola | mitochondrion | 81.01 | 80.38 |
| CDY65769 | Canola | mitochondrion, plastid | 80.62 | 80.31 |
| Bra014733.1-P | Field mustard | mitochondrion | 79.84 | 79.54 |
| AT2G39795.1 | Thale cress | mitochondrion | 60.47 | 62.4 |
| HORVU0Hr1G006190.1 | Barley | cytosol | 35.66 | 51.69 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 44.96 | 44.11 |
| HORVU3Hr1G011460.1 | Barley | mitochondrion | 43.02 | 43.7 |
| AT5G05990.1 | Thale cress | mitochondrion | 43.8 | 43.63 |
| TraesCS3A01G059200.1 | Wheat | mitochondrion | 43.41 | 43.24 |
| Os01t0143300-01 | Rice | mitochondrion | 44.19 | 43.18 |
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 42.64 | 42.47 |
| AT2G39790.1 | Thale cress | mitochondrion, plastid | 39.15 | 42.08 |
| EES00334 | Sorghum | mitochondrion, plastid | 42.25 | 40.98 |
| HORVU3Hr1G011490.1 | Barley | cytosol | 20.54 | 39.85 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 40.7 | 39.33 |
| Zm00001d039883_P001 | Maize | mitochondrion | 38.37 | 39.13 |
| HORVU3Hr1G085260.1 | Barley | cytosol | 23.26 | 37.97 |
| Os01t0143700-00 | Rice | mitochondrion | 37.21 | 37.07 |
| TraesCS3B01G072000.1 | Wheat | mitochondrion | 33.72 | 32.22 |
| TraesCS3D01G059900.1 | Wheat | plastid | 33.33 | 31.85 |
| TraesCS3A01G059600.1 | Wheat | plastid | 33.33 | 31.62 |
| HORVU3Hr1G011470.3 | Barley | mitochondrion, plastid | 34.11 | 31.43 |
| TraesCS3D01G059700.1 | Wheat | mitochondrion | 34.11 | 31.32 |
| EES00333 | Sorghum | plastid | 32.95 | 31.25 |
| TraesCS3B01G072200.1 | Wheat | plastid | 32.17 | 30.74 |
| Zm00001d008610_P001 | Maize | plastid | 32.56 | 30.66 |
| Os01t0143800-01 | Rice | plastid | 30.62 | 28.73 |
| TraesCS3D01G059800.1 | Wheat | mitochondrion | 32.56 | 28.57 |
| HORVU3Hr1G011560.1 | Barley | plastid | 31.78 | 28.47 |
| TraesCS1D01G281100.1 | Wheat | mitochondrion | 27.52 | 28.17 |
| TraesCS3B01G071900.1 | Wheat | mitochondrion | 32.95 | 27.42 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 27.13 | 27.34 |
| EES19636 | Sorghum | mitochondrion | 27.13 | 27.34 |
| TraesCS3D01G059500.1 | Wheat | mitochondrion | 31.78 | 26.45 |
| Os05t0456000-01 | Rice | mitochondrion | 26.36 | 26.36 |
| TraesCS1B01G291000.1 | Wheat | mitochondrion | 26.36 | 26.15 |
| AT1G15870.1 | Thale cress | mitochondrion | 24.03 | 25.62 |
| AT4G31930.1 | Thale cress | mitochondrion | 22.48 | 24.79 |
| AT1G80720.2 | Thale cress | mitochondrion | 22.87 | 24.38 |
| TraesCS3D01G059600.1 | Wheat | mitochondrion | 25.97 | 23.1 |
| HORVU3Hr1G011580.1 | Barley | mitochondrion | 13.95 | 21.95 |
| HORVU3Hr1G011510.1 | Barley | plastid | 28.29 | 18.02 |
Protein Annotations
| Gene3D:3.10.280.10 | MapMan:35.1 | EntrezGene:824726 | UniProt:A0A178V713 | ProteinID:AEE79407.1 | EMBL:AK227795 |
| ArrayExpress:AT3G55605 | EnsemblPlantsGene:AT3G55605 | RefSeq:AT3G55605 | TAIR:AT3G55605 | RefSeq:AT3G55605-TAIR-G | EnsemblPlants:AT3G55605.1 |
| TAIR:AT3G55605.1 | EMBL:AY086417 | Unigene:At.35010 | EMBL:BT006410 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 |
| InterPro:MAM33_sf | RefSeq:NP_567025.1 | ProteinID:OAP02049.1 | PFAM:PF02330 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | UniProt:Q8LCT2 |
| SUPFAM:SSF54529 | UniParc:UPI00000A25A8 | SEG:seg | : | : | : |
Description
At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
Coordinates
chr3:+:20622607..20624051
Molecular Weight (calculated)
29014.7 Da
IEP (calculated)
4.304
GRAVY (calculated)
-0.561
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.