Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc08g078700.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G02050.1 | Solyc08g078700.2.1 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022948 | Potato | mitochondrion | 92.03 | 92.03 |
| HORVU0Hr1G006190.1 | Barley | cytosol | 27.89 | 39.33 |
| KRH49169 | Soybean | endoplasmic reticulum | 38.65 | 38.34 |
| KRH00042 | Soybean | nucleus | 38.65 | 38.19 |
| TraesCS3B01G071700.1 | Wheat | mitochondrion | 38.65 | 37.45 |
| Solyc03g079930.2.1 | Tomato | plastid | 38.25 | 37.21 |
| TraesCS3A01G059200.1 | Wheat | mitochondrion | 38.25 | 37.07 |
| HORVU3Hr1G011460.1 | Barley | mitochondrion | 37.45 | 37.01 |
| Os01t0143300-01 | Rice | mitochondrion | 38.25 | 36.36 |
| GSMUA_Achr4P16890_001 | Banana | mitochondrion | 37.05 | 35.36 |
| CDY38743 | Canola | cytosol | 20.72 | 33.99 |
| Os01t0143700-00 | Rice | mitochondrion | 34.66 | 33.59 |
| EES00334 | Sorghum | mitochondrion, plastid | 35.06 | 33.08 |
| AT5G02050.1 | Thale cress | mitochondrion, plastid | 35.06 | 32.96 |
| Zm00001d039883_P001 | Maize | mitochondrion | 33.07 | 32.81 |
| Bra005705.1-P | Field mustard | mitochondrion, plastid | 33.07 | 32.05 |
| CDY55117 | Canola | mitochondrion, plastid | 33.07 | 32.05 |
| CDX80800 | Canola | mitochondrion | 33.07 | 32.05 |
| Bra029081.1-P | Field mustard | plastid | 27.49 | 30.13 |
| HORVU3Hr1G085260.1 | Barley | cytosol | 18.33 | 29.11 |
| Os01t0143800-01 | Rice | plastid | 31.47 | 28.73 |
| EES00333 | Sorghum | plastid | 31.08 | 28.68 |
| TraesCS3A01G059600.1 | Wheat | plastid | 30.68 | 28.31 |
| HORVU3Hr1G011490.1 | Barley | cytosol | 14.74 | 27.82 |
| TraesCS3D01G059900.1 | Wheat | plastid | 29.88 | 27.78 |
| TraesCS3B01G072200.1 | Wheat | plastid | 29.08 | 27.04 |
| Zm00001d008610_P001 | Maize | plastid | 29.48 | 27.01 |
| TraesCS1D01G281100.1 | Wheat | mitochondrion | 26.69 | 26.59 |
| CDY38740 | Canola | plastid | 25.5 | 26.45 |
| CDY47064 | Canola | plastid | 25.5 | 26.02 |
| Os05t0456000-01 | Rice | mitochondrion | 26.69 | 25.97 |
| CDY70180 | Canola | plastid | 26.69 | 25.87 |
| TraesCS3D01G059600.1 | Wheat | mitochondrion | 29.88 | 25.86 |
| HORVU1Hr1G072660.2 | Barley | mitochondrion | 26.29 | 25.78 |
| TraesCS1B01G291000.1 | Wheat | mitochondrion | 26.29 | 25.38 |
| HORVU3Hr1G011560.1 | Barley | plastid | 29.08 | 25.35 |
| Bra029083.1-P | Field mustard | mitochondrion | 19.12 | 25.26 |
| TraesCS3B01G072000.1 | Wheat | mitochondrion | 27.09 | 25.19 |
| Solyc06g065800.2.1 | Tomato | mitochondrion | 23.51 | 25.0 |
| CDY47065 | Canola | plastid | 13.94 | 24.82 |
| CDY43065 | Canola | plastid | 25.9 | 24.81 |
| Bra029051.1-P | Field mustard | plastid | 25.9 | 24.81 |
| HORVU3Hr1G011470.3 | Barley | mitochondrion, plastid | 27.49 | 24.64 |
| TraesCS3D01G059700.1 | Wheat | mitochondrion | 27.49 | 24.56 |
| CDY43064 | Canola | plastid | 23.9 | 24.39 |
| Bra029050.1-P | Field mustard | plastid | 23.9 | 24.39 |
| EES19636 | Sorghum | mitochondrion | 24.7 | 24.22 |
| TraesCS3D01G059800.1 | Wheat | mitochondrion | 28.29 | 24.15 |
| CDY70179 | Canola | plastid | 23.51 | 23.98 |
| TraesCS3B01G071900.1 | Wheat | mitochondrion | 27.49 | 22.26 |
| TraesCS3D01G059500.1 | Wheat | mitochondrion | 27.49 | 22.26 |
| Solyc03g117080.2.1 | Tomato | mitochondrion | 19.12 | 20.87 |
| HORVU3Hr1G011580.1 | Barley | mitochondrion | 13.55 | 20.73 |
| Bra029082.1-P | Field mustard | plastid | 12.75 | 19.51 |
| HORVU3Hr1G011510.1 | Barley | plastid | 27.09 | 16.79 |
Protein Annotations
| EnsemblPlants:Solyc09g011250.2.1 | EnsemblPlantsGene:Solyc09g011250.2 | Gene3D:3.10.280.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005759 | InterPro:IPR036561 | InterPro:MAM33 | InterPro:MAM33_sf |
| PANTHER:PTHR10826 | PANTHER:PTHR10826:SF12 | PFAM:PF02330 | SUPFAM:SSF54529 | UniParc:UPI000276B145 | UniProt:K4CRF1 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:4581256..4587229
Molecular Weight (calculated)
28020.2 Da
IEP (calculated)
5.754
GRAVY (calculated)
-0.263
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MALYSAIRRA SKFTIPLALR SVATATASTV GNGHCGGASR SFLIPALPYS TSAVKKKRKQ SSFDDILLQI VDSEIKFAID SEFHDCVVDI PDDFPFKVHD
101: KAGKRVIVLT RDYGEETISI VVDMPNSRCE NIEDDAVNSE EESEPQPCIP LSVTVSKENG LSLEFDVRAF PNKISICGMS IKQPKSSNNQ LDYRGHAFSF
201: LNESLQKSVY EYIEARGLTG STANFILEYV ISKDTKEYIR WLKNIKNFVE N
101: KAGKRVIVLT RDYGEETISI VVDMPNSRCE NIEDDAVNSE EESEPQPCIP LSVTVSKENG LSLEFDVRAF PNKISICGMS IKQPKSSNNQ LDYRGHAFSF
201: LNESLQKSVY EYIEARGLTG STANFILEYV ISKDTKEYIR WLKNIKNFVE N
001: MGFALCIRRS ASTLASVCGR VARAQAVSAI VNRSSLVPKP SLLRPFVSRG FPYSTATEPL KSDQTLIQVI DSEIKDSFEA DDHDADEETI DSSDFPFKIE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE
101: DNPGHRTVTL TREYNGEQIK VEVSMPGLAM DENEDDVDDD EDGDGRHEKS NESSIPLVVT VTKKSGLSLE FSCTAFPDEI VIDGLSVNRP DDSSEEQLTY
201: DGPDFQELDE NMRKSFHKFL ETRGIKASAT DFLYEYMMKK DSREYLLWLK KLKTFVQE
Arabidopsis Description
At3g55605 [Source:UniProtKB/TrEMBL;Acc:Q8LCT2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.