Factsheet for Bra029081.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013872.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47065	Canola	plastid	58.08	94.33
CDY38743	Canola	cytosol	61.57	92.16
Bra029082.1-P	Field mustard	plastid	45.41	63.41
Bra029050.1-P	Field mustard	plastid	57.64	53.66
Bra029051.1-P	Field mustard	plastid	60.7	53.05
Bra029083.1-P	Field mustard	mitochondrion	37.99	45.79
Bra005705.1-P	Field mustard	mitochondrion, plastid	47.6	42.08
AT5G02050.1	Thale cress	mitochondrion, plastid	46.29	39.7
KRH49169	Soybean	endoplasmic reticulum	41.48	37.55
KRH00042	Soybean	nucleus	40.61	36.61
HORVU0Hr1G006190.1	Barley	cytosol	27.95	35.96
GSMUA_Achr4P16890_001	Banana	mitochondrion	35.81	31.18
Os01t0143300-01	Rice	mitochondrion	35.37	30.68
TraesCS3A01G059200.1	Wheat	mitochondrion	34.5	30.5
Bra014733.1-P	Field mustard	mitochondrion	34.06	30.12
TraesCS3B01G071700.1	Wheat	mitochondrion	34.06	30.12
HORVU3Hr1G011490.1	Barley	cytosol	17.47	30.08
HORVU3Hr1G011460.1	Barley	mitochondrion	33.19	29.92
Bra005013.1-P	Field mustard	mitochondrion	31.88	29.44
EES00334	Sorghum	mitochondrion, plastid	33.19	28.57
PGSC0003DMT400022948	Potato	mitochondrion	30.57	27.89
Zm00001d039883_P001	Maize	mitochondrion	30.57	27.67
Solyc09g011250.2.1	Tomato	mitochondrion	30.13	27.49
Os01t0143700-00	Rice	mitochondrion	31.0	27.41
Bra009157.1-P	Field mustard	mitochondrion	29.69	27.09
Bra026096.1-P	Field mustard	mitochondrion	28.38	26.86
Bra035158.1-P	Field mustard	mitochondrion	27.51	26.03
Bra005873.1-P	Field mustard	mitochondrion	28.38	24.9
TraesCS3A01G059600.1	Wheat	plastid	28.38	23.9
TraesCS3D01G059900.1	Wheat	plastid	27.51	23.33
EES00333	Sorghum	plastid	27.51	23.16
TraesCS3B01G072200.1	Wheat	plastid	26.64	22.59
Zm00001d008610_P001	Maize	plastid	26.64	22.26
HORVU3Hr1G011560.1	Barley	plastid	27.95	22.22
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	26.64	21.79
HORVU1Hr1G072660.2	Barley	mitochondrion	24.02	21.48
TraesCS3D01G059700.1	Wheat	mitochondrion	26.2	21.35
Bra023971.1-P	Field mustard	plastid	23.14	21.12
TraesCS3B01G072000.1	Wheat	mitochondrion	24.89	21.11
EES19636	Sorghum	mitochondrion	23.58	21.09
Os05t0456000-01	Rice	mitochondrion	23.58	20.93
HORVU3Hr1G085260.1	Barley	cytosol	14.41	20.89
Os01t0143800-01	Rice	plastid	24.89	20.73
TraesCS3D01G059800.1	Wheat	mitochondrion	26.2	20.41
TraesCS3B01G071900.1	Wheat	mitochondrion	27.51	20.32
TraesCS1D01G281100.1	Wheat	mitochondrion	21.83	19.84
TraesCS3D01G059500.1	Wheat	mitochondrion	26.64	19.68
TraesCS1B01G291000.1	Wheat	mitochondrion	21.83	19.23
TraesCS3D01G059600.1	Wheat	mitochondrion	23.58	18.62
HORVU3Hr1G011510.1	Barley	plastid	26.2	14.81
HORVU3Hr1G011580.1	Barley	mitochondrion	10.48	14.63

Protein Annotations

EnsemblPlants:Bra029081.1	EnsemblPlants:Bra029081.1-P	EnsemblPlantsGene:Bra029081	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI000253FFE8	UniProt:M4EJW4	MapMan:35.1	:	:	:

Description

AT5G02050 (E=2e-030) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA03:+:6266023..6273156

Molecular Weight (calculated)

25934.7 Da

IEP (calculated)

4.551

GRAVY (calculated)

-0.295

Length

229 amino acids

Sequence
(BLAST)

001: MSLFCPVSVA TLPFRPARSP AASLQTGAQR VTFGRSHQFS RLISFSSTSA LTPSSNLVSL LESEIESSVI NEDAPDNDEL PEWFPFQMID RPTERVLHLT
101: RKFGDETILV LIDRPKVPQD DEELVFGIPM GVYVSKDDDG LRLKFGVKAF ADEIVIDSVA VQQRPESKWS YQGPDIDDLD ENLQKAFNKF LEIRGINPTI
201: TDFLADYLAN KDKREHLRWL KDVKSFVDI

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.