Factsheet for Bra029050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013872.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02050.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43064	Canola	plastid	100.0	100.0
CDY70179	Canola	plastid	96.75	96.75
Bra029051.1-P	Field mustard	plastid	70.73	66.41
Bra029081.1-P	Field mustard	plastid	53.66	57.64
Bra029082.1-P	Field mustard	plastid	33.74	50.61
Bra005705.1-P	Field mustard	mitochondrion, plastid	44.31	42.08
AT5G02050.1	Thale cress	mitochondrion, plastid	43.09	39.7
Bra029083.1-P	Field mustard	mitochondrion	30.08	38.95
HORVU0Hr1G006190.1	Barley	cytosol	26.02	35.96
KRH49169	Soybean	endoplasmic reticulum	34.96	33.99
KRH00042	Soybean	nucleus	34.96	33.86
GSMUA_Achr4P16890_001	Banana	mitochondrion	33.33	31.18
Os01t0143300-01	Rice	mitochondrion	32.93	30.68
Bra014733.1-P	Field mustard	mitochondrion	32.11	30.5
TraesCS3A01G059200.1	Wheat	mitochondrion	32.11	30.5
HORVU3Hr1G011460.1	Barley	mitochondrion	31.3	30.32
TraesCS3B01G071700.1	Wheat	mitochondrion	31.71	30.12
Bra005013.1-P	Field mustard	mitochondrion	29.27	29.03
EES00334	Sorghum	mitochondrion, plastid	30.89	28.57
HORVU3Hr1G011490.1	Barley	cytosol	15.04	27.82
Zm00001d039883_P001	Maize	mitochondrion	28.46	27.67
Bra009157.1-P	Field mustard	mitochondrion	27.24	26.69
Os01t0143700-00	Rice	mitochondrion	27.24	25.87
PGSC0003DMT400022948	Potato	mitochondrion	25.2	24.7
EES00333	Sorghum	plastid	27.24	24.63
HORVU1Hr1G072660.2	Barley	mitochondrion	25.61	24.61
Bra005873.1-P	Field mustard	mitochondrion	26.02	24.52
Solyc09g011250.2.1	Tomato	mitochondrion	24.39	23.9
TraesCS1D01G281100.1	Wheat	mitochondrion	24.39	23.81
Zm00001d008610_P001	Maize	plastid	26.02	23.36
TraesCS3A01G059600.1	Wheat	plastid	25.2	22.79
HORVU3Hr1G085260.1	Barley	cytosol	14.63	22.78
Bra035158.1-P	Field mustard	mitochondrion	22.36	22.73
Bra026096.1-P	Field mustard	mitochondrion	22.36	22.73
TraesCS1B01G291000.1	Wheat	mitochondrion	23.98	22.69
Os05t0456000-01	Rice	mitochondrion	23.58	22.48
TraesCS3B01G072200.1	Wheat	plastid	24.39	22.22
TraesCS3D01G059900.1	Wheat	plastid	24.39	22.22
Os01t0143800-01	Rice	plastid	24.8	22.18
HORVU3Hr1G011560.1	Barley	plastid	25.2	21.53
HORVU3Hr1G011470.3	Barley	mitochondrion, plastid	24.39	21.43
EES19636	Sorghum	mitochondrion	21.95	21.09
TraesCS3D01G059800.1	Wheat	mitochondrion	24.39	20.41
TraesCS3D01G059600.1	Wheat	mitochondrion	23.58	20.0
Bra023971.1-P	Field mustard	plastid	20.33	19.92
TraesCS3B01G072000.1	Wheat	mitochondrion	21.14	19.26
TraesCS3D01G059700.1	Wheat	mitochondrion	21.14	18.51
TraesCS3D01G059500.1	Wheat	mitochondrion	23.17	18.39
TraesCS3B01G071900.1	Wheat	mitochondrion	22.76	18.06
HORVU3Hr1G011510.1	Barley	plastid	23.98	14.57
HORVU3Hr1G011580.1	Barley	mitochondrion	9.35	14.02

Protein Annotations

EnsemblPlants:Bra029050.1	EnsemblPlants:Bra029050.1-P	EnsemblPlantsGene:Bra029050	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI000253FF6A	UniProt:M4EJT4	MapMan:35.1	:	:	:

Description

AT5G02050 (E=3e-025) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA03:-:6055313..6056235

Molecular Weight (calculated)

27803.9 Da

IEP (calculated)

4.470

GRAVY (calculated)

-0.247

Length

246 amino acids

Sequence
(BLAST)

001: MSLFCGASST VATLPFRAVR SRVTLQTGAQ RVTLGGGSPQ FSRASSLISL SRGSKLSAIT ADENLVSVLE SQIESAVVKE APEEDEFPEW FPFYIVDADK
101: DRVVYLVRKF ENETIYVRIE LSRSLGDDKE KEEPKDPQPE VLTGIPIFIS VIKDDDGPSL EFIANAYVHE IVIDAVYVES PLELTWRYKG PDFADLDENL
201: QKAYHRFLEI RGIKPNITEF MADYMADKAG RERLHWLNDV KSFLDM

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.