Factsheet for Zm00001d045926_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plastid: 23198870
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88336	Sorghum	mitochondrion	86.69	86.04
TraesCS7D01G228600.1	Wheat	mitochondrion	70.72	70.99
TraesCS7B01G193700.1	Wheat	mitochondrion	70.34	69.55
HORVU7Hr1G046980.1	Barley	mitochondrion	68.06	68.32
TraesCS7A01G225900.1	Wheat	mitochondrion	68.82	68.05
Os06t0326500-01	Rice	mitochondrion	67.68	66.17
GSMUA_Achr5P23790_001	Banana	mitochondrion	42.97	41.54
GSMUA_AchrUn_...	Banana	cytosol	43.35	37.87
Zm00001d039883_P001	Maize	mitochondrion	27.38	28.46
Zm00001d032163_P001	Maize	mitochondrion	20.91	23.91
Zm00001d008610_P001	Maize	plastid	23.19	22.26

Protein Annotations

EntrezGene:100283220	Gene3D:3.10.280.10	MapMan:35.1	ProteinID:AQL03433.1	UniProt:B6TFV4	EMBL:BT064068
EMBL:EU963869	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33	InterPro:MAM33_sf	PFAM:PF02330	PANTHER:PTHR10826
PANTHER:PTHR10826:SF12	SUPFAM:SSF54529	UniParc:UPI000182D5CF	EnsemblPlantsGene:Zm00001d045926	EnsemblPlants:Zm00001d045926_P002	EnsemblPlants:Zm00001d045926_T002
SEG:seg	:	:	:	:	:

Description

Mitochondrial glycoprotein family protein

Coordinates

chr9:+:47429464..47433273

Molecular Weight (calculated)

29580.6 Da

IEP (calculated)

4.565

GRAVY (calculated)

-0.572

Length

263 amino acids

Sequence
(BLAST)

001: MSPASLAARL LRRAASTSSS PLSALVRRGL CSSAPVPLLR RLPAATSSTA GTTARRFLAS QSPASSSTSS ADDNLRRIVE SEIECVVQSE ESNTDKHIDL
101: PEDFPFEIID NPGDQSITLQ REIAGETIKA VIYTNFDTDE HLDDEDDKSG TDEESFKPLL QMVVTIKKPE GPILEFDCNF NDDELTIENM RALNRDNPDA
201: KNVYEGPQFS DLDKSLQKAL HRYLEVRGFK HSLHDWLYEY MMRKDEKEYV VWLKSMKEFI GGN

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.