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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G026900.1 Wheat plastid 61.05 56.55
TraesCS7A01G540100.1 Wheat cytosol, nucleus, plasma membrane 41.51 41.23
HORVU6Hr1G093780.3 Barley plastid 23.32 33.99
HORVU5Hr1G056340.3 Barley cytosol 29.78 33.79
HORVU3Hr1G014910.1 Barley cytosol, peroxisome 28.03 33.33
HORVU5Hr1G023700.1 Barley plasma membrane 27.09 31.6
HORVU6Hr1G017980.1 Barley cytosol, peroxisome 25.2 30.91
HORVU1Hr1G091970.5 Barley plasma membrane 28.71 30.78
HORVU5Hr1G009440.6 Barley mitochondrion 27.09 30.45
HORVU6Hr1G094920.12 Barley mitochondrion, plasma membrane 25.47 29.3
HORVU3Hr1G086490.1 Barley cytosol 28.84 29.12
HORVU3Hr1G105070.7 Barley cytosol 26.42 29.08
HORVU7Hr1G010020.1 Barley cytosol, peroxisome, plastid 24.8 28.18
HORVU1Hr1G017320.2 Barley cytosol 10.65 26.69
HORVU7Hr1G008610.5 Barley cytosol, plastid 19.14 26.3
HORVU5Hr1G087080.2 Barley cytosol 11.19 25.7
HORVU1Hr1G003630.3 Barley mitochondrion 28.3 25.67
HORVU5Hr1G084850.1 Barley cytosol 12.53 25.48
HORVU5Hr1G096710.1 Barley cytosol 11.05 25.39
HORVU1Hr1G003650.1 Barley cytosol 10.78 24.39
HORVU2Hr1G045100.5 Barley plasma membrane 17.25 23.88
HORVU2Hr1G045370.3 Barley plastid 19.54 23.62
VIT_14s0081g00350.t01 Wine grape cytosol 16.71 23.22
HORVU0Hr1G030080.2 Barley plasma membrane 19.95 23.02
HORVU3Hr1G017090.2 Barley cytosol 19.68 22.39
VIT_14s0081g00390.t01 Wine grape cytosol 15.36 22.22
HORVU2Hr1G005760.2 Barley cytosol, plasma membrane 19.68 21.07
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 16.31 21.01
PGSC0003DMT400071072 Potato cytosol 10.38 20.81
VIT_12s0059g00110.t01 Wine grape cytosol 10.78 20.67
VIT_05s0124g00670.t01 Wine grape cytosol 15.9 20.38
VIT_14s0081g00420.t01 Wine grape cytosol 16.31 20.34
VIT_05s0124g00720.t01 Wine grape cytosol 10.38 20.26
VIT_12s0059g00060.t01 Wine grape cytosol 14.02 20.23
VIT_12s0059g00130.t01 Wine grape cytosol 10.38 20.21
VIT_12s0059g00150.t01 Wine grape cytosol 10.38 19.9
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 14.02 19.89
VIT_05s0165g00010.t01 Wine grape nucleus 12.26 19.74
Bra023774.1-P Field mustard plasma membrane 16.17 19.67
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 15.36 19.59
VIT_14s0081g00360.t01 Wine grape cytosol 11.05 19.52
VIT_19s0014g05330.t01 Wine grape extracellular 15.23 19.52
VIT_12s0028g03990.t01 Wine grape cytosol 15.09 18.89
AT4G05040.1 Thale cress cytosol 14.56 18.88
VIT_12s0059g00050.t01 Wine grape plasma membrane 16.31 18.7
Bra000823.1-P Field mustard plasma membrane 11.19 18.69
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 15.36 18.63
Solyc07g061750.2.1 Tomato cytosol 14.56 18.62
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 17.52 18.6
Bra033416.1-P Field mustard cytosol 14.02 18.54
VIT_05s0165g00060.t01 Wine grape cytosol 6.33 18.5
VIT_12s0059g00090.t01 Wine grape cytosol 8.89 18.38
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 12.8 18.38
VIT_05s0029g01490.t01 Wine grape cytosol 11.73 18.28
VIT_12s0028g03960.t01 Wine grape plasma membrane 10.24 18.27
VIT_12s0028g04020.t01 Wine grape plasma membrane 7.82 18.24
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 15.5 18.17
VIT_05s0124g00460.t01 Wine grape cytosol 6.6 18.15
VIT_05s0029g01540.t01 Wine grape plasma membrane 16.31 18.14
VIT_05s0102g00050.t01 Wine grape nucleus 14.69 18.14
VIT_05s0165g00290.t01 Wine grape cytosol 14.69 18.14
VIT_13s0047g01220.t01 Wine grape plasma membrane 15.09 18.06
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 16.17 18.02
HORVU7Hr1G096820.1 Barley cytosol 13.61 17.97
VIT_05s0102g00030.t01 Wine grape cytosol 14.29 17.97
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 16.31 17.87
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 16.04 17.84
HORVU3Hr1G115720.2 Barley cytosol, peroxisome, plasma membrane 14.02 17.81
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 15.63 17.79
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 12.26 17.7
HORVU3Hr1G087640.1 Barley cytosol 13.75 17.68
AT4G03450.1 Thale cress plasma membrane 15.23 17.63
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 14.56 17.53
AT4G03480.1 Thale cress mitochondrion 15.5 17.45
VIT_05s0165g00140.t01 Wine grape cytosol 10.92 17.38
VIT_05s0029g01420.t01 Wine grape cytosol 15.36 17.38
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 15.63 17.31
AT4G03460.1 Thale cress peroxisome 14.56 17.2
VIT_12s0028g04010.t01 Wine grape cytosol 10.38 17.19
Bra034209.1-P Field mustard cytosol 14.42 17.15
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 13.48 17.04
HORVU6Hr1G000310.2 Barley cytosol, peroxisome 12.94 16.81
HORVU3Hr1G115780.11 Barley plastid 14.15 16.72
HORVU3Hr1G087050.1 Barley cytosol 12.4 16.64
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 16.04 16.6
VIT_14s0081g00370.t01 Wine grape cytosol 7.55 16.42
AT4G14390.1 Thale cress plasma membrane 15.09 16.14
HORVU3Hr1G115520.15 Barley mitochondrion, peroxisome, plastid 13.34 16.12
HORVU7Hr1G056430.1 Barley cytosol 11.86 15.97
AT4G03440.1 Thale cress cytosol 16.04 15.85
HORVU3Hr1G115640.1 Barley plastid 12.4 15.75
HORVU3Hr1G115700.1 Barley cytosol, plastid 12.26 15.66
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 14.96 15.63
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 14.29 15.52
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 14.56 15.32
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 15.5 14.97
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 16.31 14.7
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 17.39 14.56
HORVU4Hr1G058480.2 Barley cytosol, nucleus, plasma membrane 13.48 14.39
HORVU5Hr1G079730.3 Barley cytosol 10.92 14.34
HORVU4Hr1G058450.9 Barley plastid 10.65 12.85
VIT_12s0059g00120.t01 Wine grape cytosol 13.75 12.36
HORVU4Hr1G089710.1 Barley cytosol, extracellular 2.96 11.96
HORVU1Hr1G016540.30 Barley plasma membrane 13.48 9.51
Protein Annotations
Gene3D:1.25.40.20MapMan:35.2UniProt:A0A287GXL0InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:HORVU2Hr1G003780EnsemblPlants:HORVU2Hr1G003780.1InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24177PANTHER:PTHR24177:SF111SMART:SM00248SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI000B4751E5
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:8949807..8955012
Molecular Weight (calculated)
82672.1 Da
IEP (calculated)
4.722
GRAVY (calculated)
-0.450
Length
742 amino acids
Sequence
(BLAST)
001: IEKQDEAVPE QEIEEPDETV PEQEPSPPVA IQPPPQQEIE EPDKAVLEQE IEEPDEAVPE QEPSPPVAPQ PPPQQEIDEV DEAVIEQEIE EPDESVPEQE
101: PSPPVAPQPP PQQEIEEVDE VAPGQEPLPQ VAPEPAPRED QEPAPGDGST KVRMFAEFFD LPKKTPHWRW PWATRKAIRP EMLMRVVRCG HCQKLEDLSR
201: PQSPIEPDHR VTVSVLPDQI AFEGNSCLTC VKMIYEKTRP SLEQVGSDTP LHYAARSRNF KMLFHFICLI GDEYGLERVA QVLRKLNGRR ETALHEAIWQ
301: GNKYMADFLM RVDPKLAGYP PAGTGTSPLY LAISLGYTDI AQMLYSTRGG NLSYSGPDGQ NALHAAVLHS QDMIKPLLDR NEDLSKEMDE NGSTPLHCVV
401: LAQTPFIRIC SFPFPAFWFP SQSLPTGRVL HANTSAACQP DKNGLFPVHI AAMMNSRIAI HVLLTLYPRC IGFPDNQGRS FLHIAAQNKN SLVVRYACSV
501: SRRDFGSIMK SIMNAQDDDG NTALHLAVDA GDLSSFCALL GNREVLLNIR NNKNQTPLDL AWSKRKGFAY GWNPEHVMYR TLVRAGSSHA SFWRDRLQQL
601: CNLVPLESQE DEEKDLAEKK EDEGKDPAKE KKEDEEKEES AKVTDSTRTL GIGSVLIASV TFTATFTVPA GIKASDHTKD GRPGLLGMWY YNAFMMANTL
701: AFICSSIATV GLMYAGMPLV KLPIRRRHFV GSVFFASSSL TC
Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)
001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.