Factsheet for HORVU4Hr1G058480.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	nucleus, plasma membrane
MultiLoc:	nucleus
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	97.55	97.69
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	97.7	96.04
TraesCS4A01G102200.2	Wheat	nucleus	97.55	93.91
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	87.63	89.3
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	86.62	86.99
EER95067	Sorghum	cytosol, nucleus, plasma membrane	85.32	86.19
Zm00001d047772_P002	Maize	plastid	85.61	85.49
GSMUA_Achr11P...	Banana	cytosol	58.13	82.28
GSMUA_Achr9P04170_001	Banana	cytosol	59.57	81.18
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	64.75	80.65
GSMUA_Achr5P07190_001	Banana	cytosol	60.58	80.04
GSMUA_Achr6P33220_001	Banana	cytosol	61.01	77.51
CDY42145	Canola	cytosol	61.3	72.82
PGSC0003DMT400060447	Potato	cytosol, nucleus, plasma membrane	61.15	72.77
Bra034760.1-P	Field mustard	cytosol	61.15	72.65
Solyc05g054830.2.1	Tomato	nucleus	60.58	72.09
Bra038714.1-P	Field mustard	cytosol, plastid	59.71	71.92
AT3G12360.1	Thale cress	cytosol	60.72	71.53
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.61	71.47
KRG92972	Soybean	cytosol	60.14	71.45
VIT_13s0067g03880.t01	Wine grape	cytosol	60.29	71.14
CDY50335	Canola	cytosol	60.29	71.14
CDY50551	Canola	cytosol	60.29	71.14
HORVU3Hr1G087050.1	Barley	cytosol	55.68	69.98
KRH36223	Soybean	cytosol	59.57	69.93
CDY07932	Canola	nucleus, plastid	58.85	68.28
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	59.57	67.43
Bra001304.1-P	Field mustard	nucleus	58.99	67.32
CDX73985	Canola	nucleus	58.99	67.32
Solyc10g084550.1.1	Tomato	plastid	54.53	64.79
CDY08436	Canola	cytosol	61.15	64.39
PGSC0003DMT400028722	Potato	cytosol, plastid	55.97	63.77
HORVU7Hr1G056430.1	Barley	cytosol	34.24	43.19
HORVU5Hr1G079730.3	Barley	cytosol	31.94	39.29
HORVU4Hr1G058450.9	Barley	plastid	30.94	34.96
HORVU5Hr1G084850.1	Barley	cytosol	12.52	23.84
HORVU4Hr1G089710.1	Barley	cytosol, extracellular	6.04	22.83
HORVU7Hr1G096820.1	Barley	cytosol	17.7	21.89
HORVU3Hr1G087640.1	Barley	cytosol	17.84	21.49
HORVU3Hr1G115720.2	Barley	cytosol, peroxisome, plasma membrane	17.27	20.55
HORVU2Hr1G045100.5	Barley	plasma membrane	15.83	20.52
HORVU6Hr1G000310.2	Barley	cytosol, peroxisome	16.83	20.49
HORVU5Hr1G056340.3	Barley	cytosol	19.28	20.49
HORVU1Hr1G017320.2	Barley	cytosol	8.63	20.27
HORVU3Hr1G115700.1	Barley	cytosol, plastid	16.83	20.14
HORVU3Hr1G115640.1	Barley	plastid	16.69	19.86
HORVU5Hr1G023700.1	Barley	plasma membrane	17.41	19.03
HORVU6Hr1G017980.1	Barley	cytosol, peroxisome	16.55	19.01
HORVU6Hr1G093780.3	Barley	plastid	13.53	18.47
HORVU7Hr1G010020.1	Barley	cytosol, peroxisome, plastid	17.27	18.38
HORVU5Hr1G009440.6	Barley	mitochondrion	17.41	18.33
HORVU0Hr1G030080.2	Barley	plasma membrane	16.83	18.2
HORVU7Hr1G008610.5	Barley	cytosol, plastid	14.1	18.15
HORVU3Hr1G014910.1	Barley	cytosol, peroxisome	16.12	17.95
HORVU3Hr1G017090.2	Barley	cytosol	16.83	17.94
HORVU3Hr1G115520.15	Barley	mitochondrion, peroxisome, plastid	15.83	17.92
HORVU6Hr1G094920.12	Barley	mitochondrion, plasma membrane	16.12	17.36
HORVU1Hr1G091970.5	Barley	plasma membrane	17.27	17.34
HORVU3Hr1G105070.7	Barley	cytosol	16.4	16.91
HORVU3Hr1G115780.11	Barley	plastid	14.68	16.24
HORVU3Hr1G086490.1	Barley	cytosol	16.98	16.05
HORVU2Hr1G045370.3	Barley	plastid	13.67	15.47
HORVU1Hr1G003630.3	Barley	mitochondrion	17.84	15.16
HORVU2Hr1G005760.2	Barley	cytosol, plasma membrane	14.82	14.86
HORVU2Hr1G003780.1	Barley	cytosol, nucleus	14.39	13.48
HORVU1Hr1G003650.1	Barley	cytosol	5.61	11.89
HORVU5Hr1G096710.1	Barley	cytosol	4.46	9.6
HORVU5Hr1G087080.2	Barley	cytosol	4.46	9.6
HORVU1Hr1G016540.30	Barley	plasma membrane	13.38	8.85

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A287P8N3	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU4Hr1G058480	EnsemblPlants:HORVU4Hr1G058480.2	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000B47DD98	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:489251545..489254941

Molecular Weight (calculated)

74621.0 Da

IEP (calculated)

10.498

GRAVY (calculated)

-0.169

Length

695 amino acids

Sequence
(BLAST)

001: MAVDSDRGKG DLEIGLASPG SEGGGVSPAA PGRRALESCL SGKRLDQSPS PSPSRAARRP ALVMSSSGKR LDQSPSPSRP VLLMSHSSNR LDQPPGRPAL
101: AMSRSSNRLD QSPASSPTPA KGPALVMSGS SKRLEQSLAS PSPSPKAGAA APPVLVLSNS GKRMDQAGRK KYVKQVTGRH NDTELHLAAQ RGDLDAVRQI
201: IAEIDAQMTG TGEEFDSEVA EIRAAVLNEP NEVGETALLI AAEKGFIDVV VELLNHSDKE SLARKNKSGF DALHVAAKEG HRDIVKVLLD HDPSLGKTFG
301: QSNVTPLITA AIRGHLEVVN LLLERVSGLV ELSKANGKNA LHFAARQGHV EIVKSLLVSE AQLARKTDKK GQTALHMAVK GTSAAVVRAL VNADPAIVML
401: PDKNGNLALH VATRKKRSEI VNELLLLPDM NVNALTRDRK TAFDIAEGLP LSEESADIKD CLSRAGAVRA NDLNQPRDEL RKTVTEIKKD VHTQLEQARK
501: TNKNVHGIAK ELRKLHREGI NNATNSVTVV AVLFATVAFA AIFTVPGGND EKGVAIVVHA LSFKVFFIFN AIALFTSLAV VVVQITLVRG ETKAERRVVE
601: VINKLMWLAS VCTTVAFISS SYIVVGRHFR WAALLVTLIG GVIMAGVLGT MTYYVVKSKR TRSIRKKVKS TRRSGSNSWN HNSESDSEID RIYAI

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.