Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001304.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY07932 | Canola | nucleus, plastid | 98.19 | 99.83 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 95.24 | 94.46 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 64.7 | 74.9 |
| GSMUA_Achr11P... | Banana | cytosol | 59.93 | 74.34 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 61.9 | 73.92 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 77.18 | 73.67 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 66.5 | 72.58 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 60.76 | 72.55 |
| CDY42145 | Canola | cytosol | 68.97 | 71.79 |
| Solyc10g084550.1.1 | Tomato | plastid | 68.97 | 71.79 |
| CDY50551 | Canola | cytosol | 68.97 | 71.31 |
| CDY50335 | Canola | cytosol | 68.8 | 71.14 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 63.38 | 70.57 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 69.95 | 69.84 |
| EES03848 | Sorghum | cytosol | 59.77 | 65.47 |
| Zm00001d042948_P001 | Maize | cytosol | 59.77 | 65.35 |
| Os01t0837000-01 | Rice | cytosol | 59.11 | 64.75 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 58.95 | 64.68 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 58.46 | 64.38 |
| TraesCS3B01G387800.2 | Wheat | cytosol | 58.46 | 64.26 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 58.46 | 64.14 |
| CDY08436 | Canola | cytosol | 68.8 | 63.48 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 67.32 | 60.12 |
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 67.32 | 59.08 |
| Zm00001d047772_P002 | Maize | plastid | 67.49 | 59.05 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 67.32 | 58.99 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 67.0 | 58.96 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 67.98 | 58.56 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 66.01 | 58.43 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 67.32 | 56.79 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 18.23 | 46.25 |
| CDX93618 | Canola | cytosol | 21.51 | 45.49 |
| CDX88738 | Canola | plastid | 38.75 | 44.03 |
| CDX95126 | Canola | cytosol | 38.75 | 43.7 |
| CDX71059 | Canola | plastid | 38.75 | 43.22 |
| CDY58363 | Canola | cytosol | 37.6 | 41.19 |
| CDY70132 | Canola | cytosol | 35.63 | 41.18 |
| CDY10435 | Canola | cytosol | 35.47 | 40.99 |
| CDY15549 | Canola | cytosol | 37.27 | 40.68 |
| CDY17652 | Canola | cytosol | 33.83 | 38.65 |
| CDY36249 | Canola | cytosol | 33.83 | 38.5 |
| CDY19113 | Canola | cytosol | 38.92 | 37.56 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 48.93 | 35.6 |
| CDX86566 | Canola | cytosol | 33.66 | 35.53 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 36.12 | 35.37 |
| CDY59983 | Canola | cytosol | 17.24 | 34.77 |
| CDX73200 | Canola | cytosol | 17.24 | 34.77 |
| CDX99605 | Canola | cytosol | 16.09 | 34.39 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 35.14 | 34.13 |
| CDY58683 | Canola | cytosol | 12.48 | 24.92 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 21.67 | 23.36 |
| CDY16446 | Canola | cytosol | 0.49 | 21.43 |
| CDY20635 | Canola | plasma membrane | 19.87 | 20.75 |
| CDY20943 | Canola | cytosol | 19.05 | 20.17 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 15.11 | 20.09 |
| CDY69308 | Canola | plasma membrane | 19.54 | 20.07 |
| CDY39673 | Canola | plasma membrane | 19.54 | 19.83 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 18.39 | 19.38 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 18.06 | 19.06 |
| CDY40662 | Canola | plasma membrane | 17.73 | 18.72 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 18.06 | 18.64 |
| CDY58682 | Canola | cytosol | 2.46 | 17.86 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 16.26 | 17.55 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 4.43 | 17.42 |
| CDY48208 | Canola | cytosol | 17.73 | 17.34 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 16.58 | 16.5 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 16.91 | 15.92 |
| CDY45914 | Canola | cytosol | 11.33 | 15.72 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 16.09 | 13.88 |
| CDY21967 | Canola | plasma membrane | 16.09 | 12.98 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 14.78 | 12.71 |
| CDY21969 | Canola | nucleus | 5.09 | 9.25 |
| CDY20642 | Canola | nucleus | 14.94 | 6.38 |
Protein Annotations
| Gene3D:1.25.40.20 | Gene3D:1.25.40.960 | MapMan:35.1 | GO:A0A078CB12 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDX73985 | ProteinID:CDX73985 | ProteinID:CDX73985.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00111718001 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF00023 |
| PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 |
| PANTHER:PTHR24177:SF107 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI0002540554 | SEG:seg |
Description
BnaA03g30620D
Coordinates
chrLK031800:+:811303..814333
Molecular Weight (calculated)
66601.2 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.210
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRIQEEKE LEPDMEKGWA TDPVSPAGST VADLSSPTPT PRKTLVLSNS GKALMVSNSS KSLGLSNSGK RFDPTGKKKY VKQVTGRHND TELHLAAQRG
101: DLAAVKQILS DIDSQITGTI SGSDFDDEVA QIMTSVVNEV NELGETPLFT AAEKGNIDVV KELLCYTTKE SLMQKNLSGF DALHIACSQG HRAIVQLLLE
201: HEPLLSKTVA QSNATPLVSA ATRGHSEVVN ELLAKDSSLL EISRSNGKNA LHLAARQGHV DIVRTLLDKD PQLARRTDKK GQTSLHMAVK GISSEVVRLL
301: LRADPAIVML PDKFGNTVLH IATRKKRAEI VNELLQLPDT NVNALTRDHK TAYDIAEGLT HSEETQEIKE ILSRCGALKA NELNQPRDEL RKTVTEIKKD
401: VHTQLEQTRR TNKNVDGIAK ELRKLHRAGI NNATNSVTVV AVLFATVAFA AIFTVPGGDD DNGVAVMVHA TSFKIFFIFN AIALFTSLAV VVVQITLVRG
501: ETKTERRVVE VINKLMWLAS VCTSVAFISS SYIVVGRRNR YAAVVVTVIG TVTMTGILSI MTYYVVKSKR TRKVRKKEKK KKFGRTGTGS WHNANPSETE
601: SEVNPIYAI
101: DLAAVKQILS DIDSQITGTI SGSDFDDEVA QIMTSVVNEV NELGETPLFT AAEKGNIDVV KELLCYTTKE SLMQKNLSGF DALHIACSQG HRAIVQLLLE
201: HEPLLSKTVA QSNATPLVSA ATRGHSEVVN ELLAKDSSLL EISRSNGKNA LHLAARQGHV DIVRTLLDKD PQLARRTDKK GQTSLHMAVK GISSEVVRLL
301: LRADPAIVML PDKFGNTVLH IATRKKRAEI VNELLQLPDT NVNALTRDHK TAYDIAEGLT HSEETQEIKE ILSRCGALKA NELNQPRDEL RKTVTEIKKD
401: VHTQLEQTRR TNKNVDGIAK ELRKLHRAGI NNATNSVTVV AVLFATVAFA AIFTVPGGDD DNGVAVMVHA TSFKIFFIFN AIALFTSLAV VVVQITLVRG
501: ETKTERRVVE VINKLMWLAS VCTSVAFISS SYIVVGRRNR YAAVVVTVIG TVTMTGILSI MTYYVVKSKR TRKVRKKEKK KKFGRTGTGS WHNANPSETE
601: SEVNPIYAI
001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.