Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 97.31 | 99.14 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 96.04 | 97.7 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 97.03 | 95.01 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 87.13 | 90.32 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 85.15 | 86.99 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 84.16 | 86.48 |
| Zm00001d047772_P002 | Maize | plastid | 84.58 | 85.92 |
| GSMUA_Achr11P... | Banana | cytosol | 57.43 | 82.69 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 58.84 | 81.57 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 63.51 | 80.47 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 59.83 | 80.42 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 60.25 | 77.88 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 60.82 | 73.63 |
| CDY42145 | Canola | cytosol | 60.4 | 72.99 |
| Bra034760.1-P | Field mustard | cytosol | 60.25 | 72.82 |
| Solyc05g054830.2.1 | Tomato | nucleus | 60.11 | 72.77 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 58.84 | 72.1 |
| AT3G12360.1 | Thale cress | cytosol | 60.11 | 72.03 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 59.83 | 71.82 |
| KRG92972 | Soybean | cytosol | 59.41 | 71.79 |
| CDY50335 | Canola | cytosol | 59.69 | 71.65 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.64 | 71.63 |
| CDY50551 | Canola | cytosol | 59.55 | 71.48 |
| KRH36223 | Soybean | cytosol | 58.56 | 69.93 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 54.46 | 69.37 |
| CDY07932 | Canola | nucleus, plastid | 58.27 | 68.78 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 59.12 | 68.08 |
| Bra001304.1-P | Field mustard | nucleus | 58.56 | 67.98 |
| CDX73985 | Canola | nucleus | 58.56 | 67.98 |
| Solyc10g084550.1.1 | Tomato | plastid | 53.89 | 65.13 |
| CDY08436 | Canola | cytosol | 60.25 | 64.55 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 55.3 | 64.1 |
| TraesCS4D01G203200.1 | Wheat | cytosol | 34.09 | 44.63 |
| TraesCS7D01G268900.1 | Wheat | cytosol | 33.66 | 43.27 |
| TraesCS6D01G277900.1 | Wheat | cytosol, plasma membrane | 30.83 | 41.52 |
| TraesCS5D01G312200.1 | Wheat | cytosol | 31.4 | 39.29 |
| TraesCS3D01G535100.1 | Wheat | cytosol, peroxisome, plasma membrane | 11.32 | 23.6 |
| TraesCS7D01G410500.1 | Wheat | cytosol | 17.54 | 21.75 |
| TraesCS1D01G025500.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.59 | 21.24 |
| TraesCS3D01G345200.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.26 | 21.14 |
| TraesCS6D01G011400.1 | Wheat | peroxisome | 16.12 | 20.92 |
| TraesCS5D01G190200.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.38 | 20.45 |
| TraesCS7D01G043800.1 | Wheat | plastid | 12.87 | 19.91 |
| TraesCS1D01G025900.1 | Wheat | plasma membrane | 8.2 | 19.46 |
| TraesCS3D01G533500.1 | Wheat | cytosol | 15.98 | 19.15 |
| TraesCS1D01G025800.1 | Wheat | golgi, plasma membrane, vacuole | 5.09 | 19.15 |
| TraesCS5D01G343400.1 | Wheat | cytosol | 17.26 | 18.83 |
| TraesCS1D01G379500.2 | Wheat | cytosol | 15.28 | 18.46 |
| TraesCS2D01G224000.2 | Wheat | plastid | 16.83 | 18.22 |
| TraesCS6D01G394900.2 | Wheat | cytosol | 17.26 | 17.97 |
| TraesCS3D01G515100.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.41 | 17.96 |
| TraesCS4D01G326300.1 | Wheat | cytosol | 15.98 | 17.94 |
| TraesCS6D01G395300.1 | Wheat | plastid | 16.83 | 17.84 |
| TraesCS5D01G443900.1 | Wheat | mitochondrion | 16.97 | 17.78 |
| TraesCS3D01G455500.1 | Wheat | cytosol | 14.99 | 17.64 |
| TraesCS4D01G352600.1 | Wheat | plasma membrane | 16.41 | 17.6 |
| TraesCS7D01G034400.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.14 | 17.54 |
| TraesCS3D01G534600.1 | Wheat | plasma membrane | 14.99 | 17.49 |
| TraesCS3D01G042100.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.7 | 17.48 |
| TraesCS6D01G395500.1 | Wheat | plasma membrane, plastid | 16.69 | 17.08 |
| TraesCS5D01G342600.1 | Wheat | cytosol | 16.55 | 16.98 |
| TraesCS1D01G025700.1 | Wheat | plasma membrane | 17.26 | 16.97 |
| TraesCS5D01G206000.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.98 | 16.82 |
| TraesCS1D01G011300.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.83 | 16.74 |
| TraesCS7D01G019300.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.84 | 16.67 |
| TraesCS3D01G352000.1 | Wheat | cytosol | 16.69 | 16.05 |
| TraesCS6D01G395200.1 | Wheat | plasma membrane | 16.55 | 16.01 |
| TraesCS1D01G045000.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.13 | 15.67 |
| TraesCS6D01G396100.2 | Wheat | cytosol, peroxisome, plasma membrane | 16.41 | 15.57 |
| TraesCS5D01G357200.1 | Wheat | cytosol | 16.12 | 14.73 |
| TraesCS5D01G026900.1 | Wheat | plastid | 15.7 | 13.86 |
| TraesCS3D01G352300.1 | Wheat | cytosol | 5.66 | 11.98 |
| TraesCS1D01G079400.1 | Wheat | cytosol | 14.43 | 9.6 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF12796 |
| PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G203300 | EnsemblPlants:TraesCS4D01G203300.1 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:350247019..350249774
Molecular Weight (calculated)
75761.4 Da
IEP (calculated)
10.449
GRAVY (calculated)
-0.135
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAPAAAAM AVDSDRGEGD LEIGLASPVS EGGVSPVAPG RRALESCLSG KRLDQSPSPS RAVRRPALVM SSSGKRLDQS PAASPSPSRP VLVMSHSSKR
101: LDQPPGRPVL AMSRSSNRLD HSPASSSSPT PAKGPALVMS GSSKRLEQSL ASPSPSPKAG AAAPPVLVLS NSGKRMDQAG RKKYVKQVTG RHNDTELHLA
201: AQRGDLDAVR QIIAEIDAQM TGTGEEFDSE VAEIRAAVLN EPNEVGETAL LIAAEKGFID VVVELLKHSD KESLARKNKS GFDALHVAAK EGHRDIVKVL
301: LDHDPSLGKT FGQSNVTPLI TAAIRGHLEV VNLLLERVSG LVELSKANGK NALHFAARQG HVEIVKSLLV SEAQLARKTD KKGQTALHMA VKGTSAAVVR
401: ALVNADPAIV MLPDKNGNLA LHVATRKKRS EIVNELLLLP DMNVNALTRD RKTAFDIAEG LPLSEESADI KDCLSRAGAV RANDLNQPRD ELRKTVTEIK
501: KDVHTQLEQA RKTNKNVHGI AKELRKLHRE GINNATNSVT VVAVLFATVA FAAIFTVPGG NDDHGVAIVV HAVSFKVFFI FNAIALFTSL AVVVVQITLV
601: RGETKAERRV VEVINKLMWL ASVCTTVAFI SSSYIVVGRH FKWAALLVTL IGGVIMAGVL GTMTYYVVKS KRTRSIRKKV KSTRRSGSNS WNHNSESDSE
701: IDRIYAI
101: LDQPPGRPVL AMSRSSNRLD HSPASSSSPT PAKGPALVMS GSSKRLEQSL ASPSPSPKAG AAAPPVLVLS NSGKRMDQAG RKKYVKQVTG RHNDTELHLA
201: AQRGDLDAVR QIIAEIDAQM TGTGEEFDSE VAEIRAAVLN EPNEVGETAL LIAAEKGFID VVVELLKHSD KESLARKNKS GFDALHVAAK EGHRDIVKVL
301: LDHDPSLGKT FGQSNVTPLI TAAIRGHLEV VNLLLERVSG LVELSKANGK NALHFAARQG HVEIVKSLLV SEAQLARKTD KKGQTALHMA VKGTSAAVVR
401: ALVNADPAIV MLPDKNGNLA LHVATRKKRS EIVNELLLLP DMNVNALTRD RKTAFDIAEG LPLSEESADI KDCLSRAGAV RANDLNQPRD ELRKTVTEIK
501: KDVHTQLEQA RKTNKNVHGI AKELRKLHRE GINNATNSVT VVAVLFATVA FAAIFTVPGG NDDHGVAIVV HAVSFKVFFI FNAIALFTSL AVVVVQITLV
601: RGETKAERRV VEVINKLMWL ASVCTTVAFI SSSYIVVGRH FKWAALLVTL IGGVIMAGVL GTMTYYVVKS KRTRSIRKKV KSTRRSGSNS WNHNSESDSE
701: IDRIYAI
001: MEKGGMILLQ SSENQNPMID PSPTPSPSAT ATAPALVLSN SGKRMDQAGK KKYVKQVTGR HNDTELHLAA QRGDLAAVQQ ILKDINSQME GILSGEEFDA
101: EVAEIRASIV NEVNELGETA LFTAADKGHL DVVKELLKYS SRESIAKKNR SGYDPLHIAA IQGHHAIVEV LLDHDATLSQ TFGPSNATPL VSAAMRGHTE
201: VVNQLLSKAG NLLEISRSNN KNALHLAARQ GHVEVIKALL SKDPQLARRI DKKGQTALHM AVKGQSSEVV KLLLDADPAI VMQPDKSCNT ALHVATRKKR
301: AEIVELLLSL PDTNANTLTR DHKTALDIAE GLPLSEESSY IKECLARSGA LRANELNQPR DELRSTVTQI KNDVHIQLEQ TKRTNKNVHN ISKELRKLHR
401: EGINNATNSV TVVAVLFATV AFAAIFTVPG GDNNDGSAVV VGRASFKIFF IFNALALFTS LAVVVVQITL VRGETKAEKR VVEVINKLMW LASMCTSVAF
501: LASSYIVVGR KNEWAAELVT VVGGVIMAGV LGTMTYYVVK SKRTRSMRKK VKSARRSGSN SWHHSDFSNS EVDPIFAI
101: EVAEIRASIV NEVNELGETA LFTAADKGHL DVVKELLKYS SRESIAKKNR SGYDPLHIAA IQGHHAIVEV LLDHDATLSQ TFGPSNATPL VSAAMRGHTE
201: VVNQLLSKAG NLLEISRSNN KNALHLAARQ GHVEVIKALL SKDPQLARRI DKKGQTALHM AVKGQSSEVV KLLLDADPAI VMQPDKSCNT ALHVATRKKR
301: AEIVELLLSL PDTNANTLTR DHKTALDIAE GLPLSEESSY IKECLARSGA LRANELNQPR DELRSTVTQI KNDVHIQLEQ TKRTNKNVHN ISKELRKLHR
401: EGINNATNSV TVVAVLFATV AFAAIFTVPG GDNNDGSAVV VGRASFKIFF IFNALALFTS LAVVVVQITL VRGETKAEKR VVEVINKLMW LASMCTSVAF
501: LASSYIVVGR KNEWAAELVT VVGGVIMAGV LGTMTYYVVK SKRTRSMRKK VKSARRSGSN SWHHSDFSNS EVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.