Factsheet for TraesCS1D01G011300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G013200.1	Wheat	cytosol, peroxisome, plasma membrane	96.34	96.34
HORVU6Hr1G017980.1	Barley	cytosol, peroxisome	62.45	73.39
TraesCS1B01G012300.1	Wheat	peroxisome	59.92	70.18
TraesCS1D01G045000.1	Wheat	cytosol, peroxisome, plasma membrane	51.62	53.73
OQU84849	Sorghum	plasma membrane	46.84	52.28
TraesCS5D01G190200.1	Wheat	cytosol, peroxisome, plasma membrane	36.99	39.25
TraesCS1D01G025500.1	Wheat	cytosol, peroxisome, plasma membrane	22.36	37.95
TraesCS1D01G025900.1	Wheat	plasma membrane	15.75	37.58
TraesCS7D01G019300.1	Wheat	cytosol, peroxisome, plasma membrane	35.3	37.35
TraesCS6D01G394900.2	Wheat	cytosol	35.3	36.97
TraesCS3D01G515100.1	Wheat	cytosol, peroxisome, plasma membrane	33.47	36.84
TraesCS5D01G206000.1	Wheat	cytosol, peroxisome, plasma membrane	34.74	36.76
TraesCS4D01G352600.1	Wheat	plasma membrane	33.33	35.96
TraesCS6D01G395500.1	Wheat	plasma membrane, plastid	34.46	35.46
TraesCS1D01G025800.1	Wheat	golgi, plasma membrane, vacuole	9.0	34.04
TraesCS6D01G395300.1	Wheat	plastid	31.65	33.73
TraesCS6D01G395200.1	Wheat	plasma membrane	34.46	33.52
TraesCS3D01G352000.1	Wheat	cytosol	33.76	32.65
TraesCS6D01G396100.2	Wheat	cytosol, peroxisome, plasma membrane	33.9	32.35
TraesCS1D01G025700.1	Wheat	plasma membrane	32.21	31.85
TraesCS2D01G224000.2	Wheat	plastid	27.85	30.32
TraesCS5D01G357200.1	Wheat	cytosol	30.94	28.42
TraesCS3D01G042100.1	Wheat	cytosol, peroxisome, plasma membrane	23.77	26.61
TraesCS3D01G352300.1	Wheat	cytosol	12.38	26.35
TraesCS7D01G034400.1	Wheat	cytosol, peroxisome, plasma membrane	20.82	25.96
TraesCS5D01G026900.1	Wheat	plastid	29.11	25.84
VIT_14s0081g00350.t01	Wine grape	cytosol	19.41	25.84
TraesCS4D01G326300.1	Wheat	cytosol	22.78	25.71
TraesCS7D01G043800.1	Wheat	plastid	16.32	25.38
TraesCS5D01G443900.1	Wheat	mitochondrion	23.77	25.04
TraesCS5D01G343400.1	Wheat	cytosol	22.78	25.0
VIT_12s0059g00110.t01	Wine grape	cytosol	13.5	24.81
TraesCS3D01G535100.1	Wheat	cytosol, peroxisome, plasma membrane	11.81	24.78
VIT_05s0165g00010.t01	Wine grape	nucleus	16.03	24.73
TraesCS5D01G342600.1	Wheat	cytosol	23.49	24.24
VIT_12s0059g00150.t01	Wine grape	cytosol	13.08	24.03
VIT_05s0124g00720.t01	Wine grape	cytosol	12.8	23.95
TraesCS7D01G410500.1	Wheat	cytosol	19.13	23.86
VIT_12s0059g00130.t01	Wine grape	cytosol	12.66	23.62
VIT_05s0124g00670.t01	Wine grape	cytosol	19.13	23.49
VIT_12s0059g00060.t01	Wine grape	cytosol	16.88	23.35
VIT_05s0165g00060.t01	Wine grape	cytosol	8.3	23.23
TraesCS3D01G345200.1	Wheat	cytosol, peroxisome, plasma membrane	18.85	23.22
VIT_12s0028g03960.t01	Wine grape	plasma membrane	13.5	23.08
TraesCS3D01G533500.1	Wheat	cytosol	19.13	23.05
PGSC0003DMT400071072	Potato	cytosol	11.96	22.97
TraesCS6D01G011400.1	Wheat	peroxisome	17.58	22.94
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.57	22.92
VIT_12s0059g00090.t01	Wine grape	cytosol	11.53	22.84
VIT_19s0014g05330.t01	Wine grape	extracellular	18.57	22.8
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	16.6	22.56
VIT_05s0102g00050.t01	Wine grape	nucleus	18.99	22.46
TraesCS1D01G379500.2	Wheat	cytosol	18.42	22.39
VIT_05s0165g00140.t01	Wine grape	cytosol	14.63	22.32
VIT_05s0102g00030.t01	Wine grape	cytosol	18.42	22.2
VIT_05s0165g00290.t01	Wine grape	cytosol	18.71	22.13
Bra023774.1-P	Field mustard	plasma membrane	18.85	21.97
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.55	21.96
TraesCS7D01G268900.1	Wheat	cytosol	16.88	21.82
VIT_13s0047g01220.t01	Wine grape	plasma membrane	18.99	21.77
Solyc07g061750.2.1	Tomato	cytosol	17.58	21.55
TraesCS4D01G203200.1	Wheat	cytosol	16.32	21.48
VIT_05s0124g00460.t01	Wine grape	cytosol	8.16	21.48
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	15.47	21.4
VIT_14s0081g00390.t01	Wine grape	cytosol	15.33	21.25
TraesCS3D01G455500.1	Wheat	cytosol	17.86	21.13
AT4G03460.1	Thale cress	peroxisome	18.42	20.86
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	17.02	20.79
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	17.16	20.78
VIT_12s0028g04020.t01	Wine grape	plasma membrane	9.28	20.75
VIT_12s0059g00050.t01	Wine grape	plasma membrane	18.85	20.71
Bra033416.1-P	Field mustard	cytosol	16.32	20.68
TraesCS3D01G534600.1	Wheat	plasma membrane	17.58	20.63
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.72	20.59
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	15.19	20.57
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	18.85	20.55
VIT_14s0081g00420.t01	Wine grape	cytosol	17.02	20.34
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	14.77	20.31
AT4G05040.1	Thale cress	cytosol	16.32	20.28
VIT_05s0029g01540.t01	Wine grape	plasma membrane	18.99	20.24
VIT_05s0029g01420.t01	Wine grape	cytosol	18.57	20.12
VIT_12s0028g03990.t01	Wine grape	cytosol	16.74	20.07
TraesCS3D01G348800.2	Wheat	cytosol	15.61	20.0
TraesCS5D01G312200.1	Wheat	cytosol	15.89	20.0
VIT_14s0081g00360.t01	Wine grape	cytosol	11.81	20.0
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	18.71	19.97
Bra000823.1-P	Field mustard	plasma membrane	12.38	19.82
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	17.16	19.81
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	18.85	19.79
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	18.57	19.79
VIT_05s0029g01490.t01	Wine grape	cytosol	13.22	19.75
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.27	19.6
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.13	19.29
Bra034209.1-P	Field mustard	cytosol	16.74	19.07
AT4G03450.1	Thale cress	plasma membrane	17.16	19.03
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	17.16	18.21
VIT_14s0081g00370.t01	Wine grape	cytosol	8.72	18.18
AT4G03480.1	Thale cress	mitochondrion	16.74	18.06
AT4G14390.1	Thale cress	plasma membrane	17.44	17.87
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	17.72	17.75
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	17.86	17.71
VIT_12s0028g04010.t01	Wine grape	cytosol	11.11	17.63
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	16.88	17.57
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	18.57	17.19
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	16.74	16.83
AT4G03440.1	Thale cress	cytosol	17.44	16.51
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	18.99	16.4
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	19.55	15.69
VIT_12s0059g00120.t01	Wine grape	cytosol	14.63	12.61
TraesCS1D01G079400.1	Wheat	cytosol	16.6	11.11

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13857	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF111	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G011300	EnsemblPlants:TraesCS1D01G011300.1
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:6226446..6240905

Molecular Weight (calculated)

77760.9 Da

IEP (calculated)

8.195

GRAVY (calculated)

0.047

Length

711 amino acids

Sequence
(BLAST)

001: MELQSDRCDR SSMESAQDLV RKFRTLLQLM AARSGDYETP EDAAVTAAMM AGWHRDVVID LAAASEGDTQ LHRAAAGGDG VCYRRCVDLA CNGDSSRLLA
101: SNGDGDTPLH CAARAGHTGM VKHLIGLAQG DGQDDGEMAK TMARVRNNRG ETALHEAIRS GCEKDVKKMV EVLLAVDNQL ACVEAFDGTS PLFLAISLGQ
201: HWLASWLYEW GHKKLSYSGP EGQNALHAAA LDGFRHSTGI AKRLLHWNNS LARQADNSGS TPLHFAASAQ DPTLELFLFV FGDQGFESHS PLSLTTLPKK
301: WVYKFYKWRE HPTFLLVDAN PHSAFQPDRN SLYPVHVAAS AGSLVPIIIL LCHSPGCAGL RDNQGRTFLH IAVEKKKHNI VWFVACRLDN KAIMNIQDYN
401: GNTAMHLAVG GGSWDIFKIL IGNKHVCLNL TNKEGETPMD IALSNVTPTG FYFGMHARRR ILVTLTLANG KNSFCRRDRF LDQHVPKLDK KEESDKITSF
501: AQIVGVGSVL VATATFAATF TMPGGPNSTD PKIPPNGRGG TPTLAGLYAF DAFVISNTLA FICSTLATFS LVYTGVATVD IEKRIKLVAF SLALLISAAR
601: SFCAAFAFAI YVMLPPTVAH GTAMAACVMT VLALMDAFWF MWAIVTDTIV LVRREDWRSM PKRLMKLAAR ILINTVYVFW PYIVIFGLLA IKSITGHQET
701: SVPAPMPTQR L

Best Arabidopsis Sequence Match ( AT4G03500.2 )
(BLAST)

001: MGRPDVHLDR RVAENHQAIP RNNVRSTPSL DLSTLFDETS ETKPMDPKTM AAVRAGKENY LRSNNSYISV APTLVNDRGN TILHLAASSG HVSLVRYIIQ
101: KCPGLLLKSN MMGEVALHLA AEAGHLDVVW NLIDFINDIS CTNLPVAKRI YFAKNKNQDT ALHVALKGKH EVVASYLVSA AKSLSFVANR DGFSPLYLAI
201: EAGHTSLVTT MCHGTNELSS KVGGRSIVHA ALKANRKDIL DALLSKDASL INLRDEGRTS LSFGASIGYY QGFSYLFDKN RDKVYVSDDD GLFPTHMAAK
301: YGHVQILEEI LKHCPEAIEL LDRDGQNILH LAAKYGKLKV IKFILSCCKD KNKKKLINEQ DVNGNTPLHL ATINWHPKVV SMFTWDHRVD LKKRNYIGFT
401: ALDVAEENID SSYIVHQRLT WMALINAGAP KSSTPITENL RSFKKPDGGK YKDRVNTLML VATLVATMTF TAGFTLPGGY NDSFPHLGMA VLAKRTAFQV
501: FLVCDTLAMY SSIITIVALI WAQLGDLSII LKAFNIALPF LGLALTSMSI AFMAGTYVAV SHLPLLGYFV LGIGIIFLLV LLLLLVPYVS PYAHAQPLLR
601: HIFYYPYFLK LLAAGDNKNI VDVYTASDE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.