Factsheet for TraesCS3D01G345200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G351100.1	Wheat	cytosol	98.27	98.27
HORVU3Hr1G087640.1	Barley	cytosol	96.01	96.01
TraesCS7D01G410500.1	Wheat	cytosol	83.88	84.91
TraesCS6B01G437600.1	Wheat	cytosol	77.3	78.94
Os07t0193200-00	Rice	plasma membrane	66.55	68.33
TraesCS6D01G011400.1	Wheat	peroxisome	63.78	67.52
EER90917	Sorghum	cytosol, peroxisome, plasma membrane	62.56	64.93
Zm00001d013327_P001	Maize	cytosol	63.43	64.55
EER90916	Sorghum	cytosol	58.41	59.65
KXG28826	Sorghum	cytosol, peroxisome, plasma membrane	40.21	57.28
VIT_14s0081g00350.t01	Wine grape	cytosol	28.25	30.52
VIT_05s0124g00670.t01	Wine grape	cytosol	29.98	29.88
VIT_12s0059g00130.t01	Wine grape	cytosol	19.58	29.66
VIT_12s0059g00090.t01	Wine grape	cytosol	18.02	28.97
VIT_12s0059g00110.t01	Wine grape	cytosol	19.41	28.94
VIT_12s0028g04020.t01	Wine grape	plasma membrane	15.94	28.93
PGSC0003DMT400071072	Potato	cytosol	18.37	28.65
VIT_12s0059g00150.t01	Wine grape	cytosol	19.06	28.42
VIT_05s0102g00030.t01	Wine grape	cytosol	28.25	27.63
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	24.96	27.53
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.26	27.24
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.04	27.08
VIT_05s0165g00140.t01	Wine grape	cytosol	21.84	27.04
VIT_12s0028g03960.t01	Wine grape	plasma membrane	19.41	26.92
VIT_05s0124g00720.t01	Wine grape	cytosol	17.68	26.84
VIT_05s0165g00060.t01	Wine grape	cytosol	11.79	26.77
VIT_05s0165g00010.t01	Wine grape	nucleus	21.32	26.68
VIT_05s0102g00050.t01	Wine grape	nucleus	27.73	26.62
VIT_05s0165g00290.t01	Wine grape	cytosol	27.73	26.62
Solyc07g061750.2.1	Tomato	cytosol	26.69	26.55
VIT_13s0047g01220.t01	Wine grape	plasma membrane	28.42	26.45
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	26.86	26.41
VIT_12s0059g00060.t01	Wine grape	cytosol	23.4	26.26
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	23.4	26.11
Bra023774.1-P	Field mustard	plasma membrane	27.56	26.07
TraesCS3D01G533500.1	Wheat	cytosol	26.17	25.59
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	28.08	25.59
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.65	25.43
VIT_12s0059g00050.t01	Wine grape	plasma membrane	28.42	25.35
VIT_05s0029g01490.t01	Wine grape	cytosol	20.8	25.21
TraesCS1D01G079400.1	Wheat	cytosol	45.75	24.86
AT1G03670.1	Thale cress	cytosol, peroxisome, plasma membrane	26.52	24.84
VIT_05s0124g00460.t01	Wine grape	cytosol	11.61	24.81
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	28.6	24.74
TraesCS3D01G534600.1	Wheat	plasma membrane	25.82	24.59
VIT_19s0014g05330.t01	Wine grape	extracellular	24.61	24.52
TraesCS1D01G379500.2	Wheat	cytosol	24.78	24.44
VIT_05s0029g01420.t01	Wine grape	cytosol	27.56	24.24
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	28.42	24.22
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.65	24.18
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.9	24.17
VIT_05s0029g01540.t01	Wine grape	plasma membrane	27.73	23.99
Bra033416.1-P	Field mustard	cytosol	23.22	23.89
VIT_12s0028g03990.t01	Wine grape	cytosol	24.44	23.78
TraesCS3D01G455500.1	Wheat	cytosol	24.61	23.63
TraesCS3D01G535100.1	Wheat	cytosol, peroxisome, plasma membrane	13.86	23.6
VIT_14s0081g00390.t01	Wine grape	cytosol	20.97	23.59
Bra034209.1-P	Field mustard	cytosol	25.13	23.24
VIT_14s0081g00420.t01	Wine grape	cytosol	23.92	23.19
TraesCS4D01G203200.1	Wheat	cytosol	21.32	22.78
VIT_14s0081g00360.t01	Wine grape	cytosol	16.46	22.62
TraesCS2D01G224000.2	Wheat	plastid	25.48	22.51
AT4G03460.1	Thale cress	peroxisome	24.44	22.45
AT4G03500.1	Thale cress	cytosol, peroxisome, plasma membrane	24.78	21.93
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.52	21.89
TraesCS3D01G348800.2	Wheat	cytosol	20.62	21.44
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	28.42	21.35
TraesCS7D01G268900.1	Wheat	cytosol	20.28	21.27
TraesCS3D01G042100.1	Wheat	cytosol, peroxisome, plasma membrane	23.4	21.26
Bra000823.1-P	Field mustard	plasma membrane	16.12	20.95
TraesCS5D01G190200.1	Wheat	cytosol, peroxisome, plasma membrane	23.92	20.6
TraesCS4D01G326300.1	Wheat	cytosol	22.36	20.48
AT4G03490.3	Thale cress	cytosol, peroxisome, plasma membrane	25.13	20.42
TraesCS7D01G043800.1	Wheat	plastid	15.94	20.13
TraesCS5D01G206000.1	Wheat	cytosol, peroxisome, plasma membrane	23.4	20.09
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	18.2	20.0
TraesCS7D01G019300.1	Wheat	cytosol, peroxisome, plasma membrane	23.22	19.94
TraesCS5D01G343400.1	Wheat	cytosol	22.36	19.91
AT4G05040.1	Thale cress	cytosol	19.58	19.76
TraesCS5D01G443900.1	Wheat	mitochondrion	23.05	19.7
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	28.08	19.68
TraesCS7D01G034400.1	Wheat	cytosol, peroxisome, plasma membrane	19.41	19.65
VIT_12s0028g04010.t01	Wine grape	cytosol	15.25	19.64
TraesCS6D01G395300.1	Wheat	plastid	22.53	19.49
TraesCS5D01G312200.1	Wheat	cytosol	19.06	19.47
TraesCS5D01G342600.1	Wheat	cytosol	23.22	19.45
TraesCS4D01G352600.1	Wheat	plasma membrane	22.18	19.42
TraesCS3D01G515100.1	Wheat	cytosol, peroxisome, plasma membrane	21.66	19.35
AT4G03450.1	Thale cress	plasma membrane	21.49	19.34
VIT_14s0081g00370.t01	Wine grape	cytosol	11.27	19.06
TraesCS1D01G011300.1	Wheat	cytosol, peroxisome, plasma membrane	23.22	18.85
TraesCS6D01G395500.1	Wheat	plasma membrane, plastid	22.53	18.81
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	28.42	18.51
AT4G14400.1	Thale cress	cytosol, nucleus, peroxisome	21.49	18.51
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	22.53	18.44
TraesCS6D01G394900.2	Wheat	cytosol	21.66	18.41
TraesCS6D01G395200.1	Wheat	plasma membrane	23.22	18.33
TraesCS1D01G045000.1	Wheat	cytosol, peroxisome, plasma membrane	21.66	18.3
AT4G14390.1	Thale cress	plasma membrane	21.66	18.01
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	22.18	17.85
TraesCS3D01G352000.1	Wheat	cytosol	22.7	17.82
TraesCS6D01G396100.2	Wheat	cytosol, peroxisome, plasma membrane	22.88	17.72
AT4G03480.1	Thale cress	mitochondrion	20.1	17.6
TraesCS1D01G025700.1	Wheat	plasma membrane	21.66	17.39
TraesCS3D01G352300.1	Wheat	cytosol	10.05	17.37
AT4G03470.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	20.45	17.28
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	21.14	17.26
TraesCS1D01G025500.1	Wheat	cytosol, peroxisome, plasma membrane	12.48	17.18
TraesCS5D01G357200.1	Wheat	cytosol	22.18	16.54
AT4G03440.1	Thale cress	cytosol	21.32	16.38
TraesCS1D01G025900.1	Wheat	plasma membrane	8.32	16.11
TraesCS1D01G025800.1	Wheat	golgi, plasma membrane, vacuole	5.03	15.43
VIT_12s0059g00120.t01	Wine grape	cytosol	20.1	14.06
TraesCS5D01G026900.1	Wheat	plastid	18.72	13.48

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF84	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G345200	EnsemblPlants:TraesCS3D01G345200.1
TIGR:cd00204	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:456646262..456648075

Molecular Weight (calculated)

62464.6 Da

IEP (calculated)

9.616

GRAVY (calculated)

-0.036

Length

577 amino acids

Sequence
(BLAST)

001: MDPALHKAAV QGSVASLKKL VAENPNILGS KTPQQNTALH IAAELGHAGF AEAALGVDDK LLVSKNADGD TPLHLAARAG KVDVADLLIG RASAWPAEHP
101: RHSPAAQNGK AGEPPRSSPG TAQGPLFMAN KVGDTPLHEA VKHGRSAVAL RLLDAEPGRG HALNVKQQTP LHIAAREGLA DVVAKIVSQP WVHEKFVPSD
201: SVSGTALHQA VLGGHARVVE ILLDATPPDQ IGLTDSSENN ALHYAAQKNN ARVVKLLLNR KVDLAYKRNR DLQSPLHVAA YYGSTDAMVE LLKQCPDVAE
301: MVDSNGRNAF HVAITSGKVD ALKRLLKHVR PEEIVNRVDR AGNTPLHLAA SLSRIQSALL LLKDRRVNPC VLNREGQSAR SLIEKRAATE EMDTYEMYLW
401: KTLKKHEASR CKKEQLPPIA TYQSLRSRRA GHDEYYELSV GTYTLVATLI ATVSFAATFT MPGGYSQTDG TALHGHKAAF KIFVISNTVA MCSSIVVVFC
501: FIWAWRDPVK FKLDQLMWGH RLTILACLAM VVSLMTAVYI TVAPTARWPA YVVIAIGVST PAVVFLILGK EALYVPM

Best Arabidopsis Sequence Match ( AT1G03670.1 )
(BLAST)

001: MKCDSKSETV SSSSTSGSLS DPDQWTIFKD KDESEIMNPA ILCAVRAGDK VSLLKRINDD VKVTQRLVDN QGNSILHIAA ALGHVHIVEF IISTFPNLLQ
101: NVNLMGETTL HVAARAGSLN IVEILVRFIT ESSSYDAFIA AKSKNGDTAL HAALKGKHVE VAFCLVSVKH DVSFDKNNDE ASPLYMAVEA GYHELVLKML
201: ESSSSPSILA SMFSGKSVIH AAMKANRRDI LGIVLRQDPG LIELRNEEGR TCLSYGASMG CYEGIRYILA EFDKAASSLC YVADDDGFTP IHMAAKEGHV
301: RIIKEFLKHC PDSRELLNNQ CQNIFHVAAI AGKSKVVKYL LKLDEGKRMM NEQDINGNTP LHLATKHRYP IVVNMLTWND GINLRALNNE GFTALDIAET
401: MKDNNAYVLY KRLIWMALVS AGAPHGPNLI PLTVSQSSKQ SPERYKDSVN TLMVTATLVA TVTFAAGLTL PGGYMSSAPH LGMAALVNKL NFKVFLLLNN
501: IAMCTSVVTV MALIWAQLGD ALLTKKAFRL ALPLLLTAVV SMMMASVAGL TLVVSDLPWL SHLVLAIDSA FLVFLMLLII PYAFSSTRHG FLRHIFYFPY
601: FLMLLVVSEG SNNMDG

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I2G1]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.