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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90917 Sorghum cytosol, peroxisome, plasma membrane 69.38 70.5
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 47.61 66.42
HORVU7Hr1G096820.1 Barley cytosol 58.41 58.72
TraesCS3A01G351100.1 Wheat cytosol 59.82 58.58
HORVU3Hr1G087640.1 Barley cytosol 59.65 58.41
TraesCS3D01G345200.1 Wheat cytosol, peroxisome, plasma membrane 59.65 58.41
Os07t0193200-00 Rice plasma membrane 57.7 58.01
TraesCS7B01G317700.1 Wheat cytosol, peroxisome, plasma membrane 58.23 57.72
TraesCS7D01G410500.1 Wheat cytosol 58.23 57.72
TraesCS7A01G417600.1 Wheat cytosol, peroxisome, plasma membrane 58.23 56.14
TraesCS6B01G437600.1 Wheat cytosol 55.04 55.04
TraesCS6B01G013100.1 Wheat cytosol, mitochondrion, plasma membrane 55.04 54.75
TraesCS6B01G013000.1 Wheat cytosol, peroxisome, plasma membrane 50.09 49.48
TraesCS6D01G011400.1 Wheat peroxisome 46.02 47.71
OQU83144 Sorghum cytosol 21.42 30.1
OQU83139 Sorghum cytosol 11.86 29.91
VIT_05s0124g00670.t01 Wine grape cytosol 29.73 29.02
VIT_14s0081g00350.t01 Wine grape cytosol 26.55 28.09
VIT_12s0059g00130.t01 Wine grape cytosol 18.76 27.82
VIT_05s0165g00140.t01 Wine grape cytosol 22.83 27.68
PGSC0003DMT400071072 Potato cytosol 17.88 27.3
VIT_05s0124g00720.t01 Wine grape cytosol 18.23 27.11
VIT_12s0059g00110.t01 Wine grape cytosol 18.41 26.87
VIT_12s0059g00090.t01 Wine grape cytosol 16.99 26.74
VIT_12s0028g04020.t01 Wine grape plasma membrane 15.04 26.73
VIT_05s0165g00010.t01 Wine grape nucleus 21.77 26.68
VIT_12s0059g00150.t01 Wine grape cytosol 18.23 26.61
Solyc07g061750.2.1 Tomato cytosol 27.26 26.55
KXG36379 Sorghum cytosol 18.58 26.32
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 23.89 26.26
VIT_12s0059g00060.t01 Wine grape cytosol 23.89 26.26
VIT_05s0102g00030.t01 Wine grape cytosol 27.26 26.1
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 26.55 26.04
VIT_13s0047g01220.t01 Wine grape plasma membrane 28.5 25.97
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 29.03 25.91
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 23.89 25.81
VIT_05s0029g01490.t01 Wine grape cytosol 21.42 25.42
VIT_05s0102g00050.t01 Wine grape nucleus 26.9 25.29
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 26.02 25.26
VIT_05s0165g00290.t01 Wine grape cytosol 26.73 25.12
Bra023774.1-P Field mustard plasma membrane 26.9 24.92
VIT_12s0059g00050.t01 Wine grape plasma membrane 28.5 24.88
EER89595 Sorghum cytosol 16.64 24.87
Bra034209.1-P Field mustard cytosol 27.43 24.84
KXG36384 Sorghum cytosol 17.52 24.81
VIT_12s0028g03990.t01 Wine grape cytosol 26.02 24.79
VIT_12s0028g03960.t01 Wine grape plasma membrane 18.23 24.76
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 26.02 24.75
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 25.66 24.7
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 29.38 24.52
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 28.85 24.44
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 28.5 24.17
VIT_05s0124g00460.t01 Wine grape cytosol 11.5 24.07
VIT_05s0165g00060.t01 Wine grape cytosol 10.8 24.02
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 21.95 23.98
OQU83151 Sorghum cytosol 6.19 23.97
VIT_19s0014g05330.t01 Wine grape extracellular 24.42 23.83
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 23.01 23.64
VIT_05s0029g01420.t01 Wine grape cytosol 26.9 23.17
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 25.13 23.05
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 24.96 23.04
EER97319 Sorghum plastid 26.37 22.58
AT4G03460.1 Thale cress peroxisome 24.96 22.45
VIT_14s0081g00420.t01 Wine grape cytosol 23.36 22.18
OQU83143 Sorghum cytosol 13.63 22.06
VIT_05s0029g01540.t01 Wine grape plasma membrane 26.02 22.04
VIT_14s0081g00390.t01 Wine grape cytosol 20.0 22.03
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 25.31 21.93
Bra033416.1-P Field mustard cytosol 21.77 21.93
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 26.73 21.27
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 28.67 21.09
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 23.36 21.05
VIT_14s0081g00360.t01 Wine grape cytosol 15.58 20.95
AT4G05040.1 Thale cress cytosol 20.71 20.45
KXG27928 Sorghum plasma membrane 23.89 20.33
EES18294 Sorghum plasma membrane 25.13 20.31
OQU78058 Sorghum plasma membrane 22.48 20.29
OQU89270 Sorghum cytosol 20.18 20.28
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 24.96 20.17
EES03848 Sorghum cytosol 19.82 20.14
EER95066 Sorghum cytosol 20.18 20.11
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 23.72 19.82
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 28.67 19.68
Bra000823.1-P Field mustard plasma membrane 15.4 19.59
OQU84849 Sorghum plasma membrane 21.95 19.47
OQU80298 Sorghum mitochondrion, plastid 23.89 19.42
VIT_12s0028g04010.t01 Wine grape cytosol 15.4 19.42
AT4G03450.1 Thale cress plasma membrane 21.95 19.34
EES15259 Sorghum cytosol 19.11 19.22
EES07299 Sorghum cytosol, plasma membrane 17.52 18.71
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 21.42 18.5
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 28.85 18.4
EER97054 Sorghum cytosol 18.23 18.33
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 22.83 18.3
VIT_14s0081g00370.t01 Wine grape cytosol 10.97 18.18
AT4G03480.1 Thale cress mitochondrion 21.06 18.06
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 21.24 17.91
AT4G14390.1 Thale cress plasma membrane 21.59 17.58
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 22.3 17.57
EER96593 Sorghum plasma membrane 15.04 17.56
EER88274 Sorghum cytosol 23.54 17.55
OQU84108 Sorghum cytosol, nucleus, plasma membrane 23.19 17.21
EER87702 Sorghum nucleus 21.95 16.85
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 20.18 16.69
EER87700 Sorghum cytosol 23.54 16.5
AT4G03440.1 Thale cress cytosol 21.77 16.38
EER95067 Sorghum cytosol, nucleus, plasma membrane 19.47 15.99
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 16.99 15.56
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 24.42 14.78
VIT_12s0059g00120.t01 Wine grape cytosol 21.06 14.42
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfUniProt:C5WLV4
EnsemblPlants:EER90916ProteinID:EER90916ProteinID:EER90916.1GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770PFAM:PF00023PFAM:PF12796
PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297PANTHER:PTHR24177PANTHER:PTHR24177:SF84
SMART:SM00248EnsemblPlantsGene:SORBI_3001G099500SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0001A823E9RefSeq:XP_002463918.1
Description
hypothetical protein
Coordinates
chr1:+:7615986..7618270
Molecular Weight (calculated)
62778.0 Da
IEP (calculated)
9.322
GRAVY (calculated)
-0.149
Length
565 amino acids
Sequence
(BLAST)
001: METEAKRGMD PALYKAATQG CVRSLRKLVV KDVKILNSKT PQDNTALHLA ALHGHPKFAR QVLAVSEELM VARNADGDTA LHLAAKTGRQ KVAEVLVDIA
101: RAWPDEPNSE DTLLKSPLIM TNHEGNNPLH EAVRHRKTAV ALALLDADHS RAYDPNEKME SPLHMAAREG LVHVVRKVFD FAWVEPQYVS SAAVSGTALH
201: QAVLGGHTKV VEIMLEKHEQ LVDMTDSNGN NALHYAAQKN NSHVVELLLH KKTQLAYSRN KDWQSPLHVA AQYGSTAVIK ALLHHCSDVS EMEDGNGRNA
301: FHASVISGKA NALRCLLRRV RPAELLNRAD KNGDTPLHLA AKMSHVHSAL MLLRDRRVDP CIRDRDDQTA RSLVEKKLHT GETDAHEMYL WKQLKRQESA
401: RCRKQQLPPV TFSGDSRTSS HKYFERSVET YILVATLIAT VTFAATFTMP GGYYQDSGIA IHGHDTAFKI FVISNTVAMC SAIVVVYCFI WAWKDPLKFK
501: IDQLVWGHRL TMIAGLGMLV SLMASVYITV PHKSRWPAYV VIAIGMSTPA VVVLMLGRDV IFVPL
Best Arabidopsis Sequence Match ( AT4G03490.4 )
(BLAST)
001: MDPETYRAVV MGKVQEFEKV MEENEIPVLD QVTFQGNTIL HLAAIYGHDH LVRRILAYEL NILRNWKRGL NCNFVPSFSH YQTLLVRRNY KGDLALHVAA
101: AAGHKLIVGL LIDCLRQLPQ DITMVIGSEQ MVIGNIFRVS NNDGNTALHL SLKGNHVSVS LQLVREDRST CFLLDKEDVS PLYMAAEAGY VSLVEHMLRG
201: LDASFVGKSV LCAAVKSQNL DILTAVLESD SDLVESRDED GRTPLATAAS IGYDIGVQHM LTRFASSTQV AYIKNEDGSF PIHSACSARC TSALKVILKH
301: HPDTIEMLNS QGQNVLHVAA KSGNARAVGY LLRKSDVKRL INEQDIEGNT PLHLASSNSH PKVVSLFIHD RRVDLKILNY KGFTALDAAE DHMATIPSLQ
401: EWLIWMALVA AGTTRAPRVH LRADIPGLTT DEDLILKIHK DRVNTLLVVA TLVATMAFAA GLSVPLGYNS TEFKSNVKHS YEESAFHAFV ICNSIAVYTA
501: VISTVALIGT QLADLKCMLT TFKFIVPLLG FSIIAMSLAF VAGLYLVLGH HYWLAIFVLA SGGFYLMALL LLIIPYASPY TFSPLFFRYF LRFPFSMLVS
601: FAYWRDGTDG ECSSRVFRWS FLG
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G03490]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.