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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G025800.1 Wheat golgi, plasma membrane, vacuole 14.06 42.02
HORVU3Hr1G014910.1 Barley cytosol, peroxisome 46.44 41.83
TraesCS5B01G352200.1 Wheat cytosol 16.37 41.07
TraesCS1D01G025900.1 Wheat plasma membrane 21.71 40.94
TraesCS1D01G025500.1 Wheat cytosol, peroxisome, plasma membrane 29.54 39.62
TraesCS5B01G352700.1 Wheat plasma membrane 29.54 37.64
TraesCS1B01G032300.1 Wheat plastid 46.98 36.82
TraesCS5B01G352400.1 Wheat cytosol 46.8 36.38
OQU84108 Sorghum cytosol, nucleus, plasma membrane 48.93 36.14
TraesCSU01G003000.1 Wheat cytosol 47.69 36.12
OQU80298 Sorghum mitochondrion, plastid 44.31 35.83
TraesCS1D01G025700.1 Wheat plasma membrane 45.02 35.19
TraesCS5B01G352300.1 Wheat plasma membrane 46.98 33.42
TraesCS5B01G352100.1 Wheat cytosol 42.7 32.88
TraesCS5D01G357200.1 Wheat cytosol 45.02 32.69
HORVU1Hr1G003630.3 Barley mitochondrion 45.55 31.3
OQU84849 Sorghum plasma membrane 34.52 30.46
TraesCS5B01G352800.1 Wheat cytosol 30.78 30.14
KXG36379 Sorghum cytosol 21.0 29.57
EER88274 Sorghum cytosol 36.12 26.78
OQU78058 Sorghum plasma membrane 29.54 26.52
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 29.0 26.42
OQU83144 Sorghum cytosol 18.86 26.37
KXG36384 Sorghum cytosol 18.33 25.81
VIT_14s0081g00350.t01 Wine grape cytosol 24.38 25.66
EER87702 Sorghum nucleus 33.45 25.54
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 27.76 24.88
EER87700 Sorghum cytosol 35.41 24.69
EER97319 Sorghum plastid 27.94 23.79
KXG27928 Sorghum plasma membrane 27.76 23.49
EES18294 Sorghum plasma membrane 29.0 23.32
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 23.49 22.22
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 26.51 22.04
VIT_19s0014g05330.t01 Wine grape extracellular 22.6 21.93
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 25.27 21.71
EER90917 Sorghum cytosol, peroxisome, plasma membrane 21.35 21.58
Bra001112.1-P Field mustard cytosol, peroxisome, plasma membrane 21.89 21.35
PGSC0003DMT400071072 Potato cytosol 14.06 21.35
VIT_14s0081g00390.t01 Wine grape cytosol 19.39 21.25
VIT_05s0165g00270.t01 Wine grape cytosol, mitochondrion, plasma membrane 19.75 21.22
VIT_12s0028g04020.t01 Wine grape plasma membrane 11.92 21.07
VIT_12s0059g00130.t01 Wine grape cytosol 14.23 21.0
VIT_12s0059g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 21.71 20.96
VIT_12s0059g00110.t01 Wine grape cytosol 14.41 20.93
VIT_05s0124g00670.t01 Wine grape cytosol 21.35 20.73
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 20.11 20.55
Bra023774.1-P Field mustard plasma membrane 22.24 20.49
VIT_05s0020g04750.t01 Wine grape cytosol, peroxisome, plasma membrane 18.68 20.43
VIT_05s0124g00460.t01 Wine grape cytosol 9.79 20.37
EER90916 Sorghum cytosol 20.28 20.18
Solyc07g061750.2.1 Tomato cytosol 20.82 20.17
VIT_12s0059g00150.t01 Wine grape cytosol 13.88 20.16
VIT_05s0102g00050.t01 Wine grape nucleus 21.53 20.13
Solyc07g061740.2.1 Tomato mitochondrion, plasma membrane 18.51 20.12
EER89595 Sorghum cytosol 13.52 20.11
OQU83139 Sorghum cytosol 8.01 20.09
VIT_12s0028g03990.t01 Wine grape cytosol 21.17 20.07
VIT_12s0059g00090.t01 Wine grape cytosol 12.81 20.06
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 14.41 20.0
VIT_05s0165g00290.t01 Wine grape cytosol 21.35 19.97
VIT_05s0165g00010.t01 Wine grape nucleus 16.37 19.96
VIT_12s0028g03960.t01 Wine grape plasma membrane 14.77 19.95
EER96593 Sorghum plasma membrane 17.08 19.83
VIT_05s0102g00030.t01 Wine grape cytosol 20.82 19.83
Bra034209.1-P Field mustard cytosol 21.89 19.71
VIT_05s0165g00060.t01 Wine grape cytosol 8.9 19.68
VIT_14s0081g00420.t01 Wine grape cytosol 20.64 19.5
VIT_12s0059g00060.t01 Wine grape cytosol 17.79 19.46
VIT_14s0081g00400.t01 Wine grape cytosol, peroxisome, plasma membrane 24.02 19.31
VIT_05s0029g01540.t01 Wine grape plasma membrane 22.78 19.19
VIT_05s0165g00160.t01 Wine grape cytosol, peroxisome, plasma membrane 21.53 19.12
VIT_12s0059g00050.t01 Wine grape plasma membrane 21.89 19.01
VIT_05s0102g00060.t01 Wine grape cytosol, nucleus, plasma membrane 19.75 18.91
VIT_14s0081g00360.t01 Wine grape cytosol 14.06 18.81
VIT_14s0081g00370.t01 Wine grape cytosol 11.39 18.77
VIT_12s0028g03950.t01 Wine grape cytosol, extracellular, plasma membrane 22.24 18.74
EES07299 Sorghum cytosol, plasma membrane 17.62 18.71
VIT_05s0029g01490.t01 Wine grape cytosol 15.84 18.7
EER95066 Sorghum cytosol 18.86 18.69
Bra020727.1-P Field mustard cytosol, peroxisome, plasma membrane 20.28 18.63
Bra033416.1-P Field mustard cytosol 18.51 18.54
EES03848 Sorghum cytosol 18.33 18.53
OQU83151 Sorghum cytosol 4.8 18.49
AT4G03460.1 Thale cress peroxisome 20.64 18.47
AT4G03500.1 Thale cress cytosol, peroxisome, plasma membrane 21.35 18.4
VIT_12s0028g04030.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 22.06 18.32
VIT_05s0124g00720.t01 Wine grape cytosol 12.28 18.16
EES15259 Sorghum cytosol 18.15 18.15
VIT_05s0029g01420.t01 Wine grape cytosol 21.17 18.14
VIT_05s0165g00140.t01 Wine grape cytosol 14.95 18.03
AT1G03670.1 Thale cress cytosol, peroxisome, plasma membrane 19.75 18.02
Bra000823.1-P Field mustard plasma membrane 14.06 17.79
VIT_12s0028g03920.t01 Wine grape cytosol, peroxisome, plasma membrane 21.0 17.72
VIT_13s0047g01220.t01 Wine grape plasma membrane 19.39 17.58
EER97054 Sorghum cytosol 17.44 17.44
AT4G03490.3 Thale cress cytosol, peroxisome, plasma membrane 21.89 17.32
KRH33072 Soybean cytosol 7.12 17.24
AT4G05040.1 Thale cress cytosol 17.44 17.13
VIT_12s0028g04010.t01 Wine grape cytosol 13.52 16.96
AT4G03450.1 Thale cress plasma membrane 19.22 16.85
AT4G14400.1 Thale cress cytosol, nucleus, peroxisome 19.22 16.12
OQU83143 Sorghum cytosol 9.96 16.05
Bra034210.1-P Field mustard cytosol, nucleus, plasma membrane 20.11 16.03
EER95067 Sorghum cytosol, nucleus, plasma membrane 19.57 15.99
AT4G03480.1 Thale cress mitochondrion 18.51 15.78
VIT_05s0029g01430.t01 Wine grape cytosol, nucleus, plasma membrane 21.53 15.76
AT4G14390.1 Thale cress plasma membrane 18.86 15.27
AT4G03470.1 Thale cress cytosol, nucleus, plasma membrane, plastid 18.51 15.23
Bra034211.1-P Field mustard cytosol, nucleus, plasma membrane 19.22 15.06
VIT_12s0028g04000.t01 Wine grape cytosol, plasma membrane 21.89 14.95
VIT_12s0059g00080.t01 Wine grape cytosol, nucleus, plasma membrane 21.71 13.77
AT4G03440.1 Thale cress cytosol 17.44 13.05
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 21.17 12.74
VIT_12s0059g00120.t01 Wine grape cytosol 17.97 12.24
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1UniProt:A0A1W0W4G1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770EnsemblPlants:OQU89270ProteinID:OQU89270ProteinID:OQU89270.1
PFAM:PF12796PFAM:PF13857PFAM:PF13962InterPro:PGG_domPFscan:PS50297PANTHER:PTHR24177
PANTHER:PTHR24177:SF112SMART:SM00248EnsemblPlantsGene:SORBI_3002G167300SUPFAM:SSF48403TMHMM:TMhelixUniParc:UPI0009DC8527
Description
hypothetical protein
Coordinates
chr2:+:52307713..52311789
Molecular Weight (calculated)
61349.6 Da
IEP (calculated)
7.701
GRAVY (calculated)
-0.049
Length
562 amino acids
Sequence
(BLAST)
001: MQPTPADVEQ GIVDAVPRRH LKGVTMEGDT ALHLVAANGD DSSFQKCAVV IHGKDKDLLC RQNNKGDTPL HCAARTAGRS EMVSHLIVLA TVDNIVEQLL
101: RQENNSNETV LHMAVRTGDH QLVKHLLAKD PKLACFPEKG TSPLYLAILL DQGSIAKMLY DESENNVLSY AGPNGQNALH AAVLRGPDVQ ACRTEDGVEA
201: HVHANTAALY QPDNNGLYPI HVAAVVVGAS VWLMRFERHP IPMFVKKCPS SAGLRDAKGR TFLHVAVEKK NVDVVWYACR HPSLAWVLNM QDGEGNTALH
301: LAVRDGNTLG IFRHLFGSMQ VNLNLTNAKK QTPRDIALYH LRPSFYFETA NPEIWIKRAL QIAGATRGVY RKDHFDEEYE NHHGLNSDYN KDKELEMLKD
401: STQSRSIGSV LIATVTFGAM FALPGGYKAD DHSFGGTPTP AGMYAFHAFM IANTIAFISS TIATLGFMFA GDAGISLARR KLHFSGAMVS TQYSITALTI
501: AFALGVYTVL APVAQKTAIL ICVISPLVVL YNISDFWCSA AYGRNNTISI SISPAQAPAR FT
Best Arabidopsis Sequence Match ( AT4G03490.3 )
(BLAST)
001: MDPETYRAVV MGKVQEFEKV MEENEIPVLD QVTFQGNTIL HLAAIYGHDH LVRRILAYEL NILRNWKRGL NCNFVPSFSH YQTLLVRRNY KGDLALHVAA
101: AAGHKLIVGL LIDCLRQLPQ DITMVIGSEQ MVIGNIFRVS NNDGNTALHL SLKGNHVSVS LQLVREDRST CFLLDKEDVS PLYMAAEAGY VSLVEHMLRG
201: LDASFVGKSV LCAAVKSQNL DILTAVLESD SDLVESRDED GRTPLATAAS IGYDIGVQHM LTRFASSTQV AYIKNEDGSF PIHSACSARC TSALKVILKH
301: HPDTIEMLNS QGQNVLHVAA KSGNARAVGY LLRKSDVKRL INEQDIEGNT PLHLASSNSH PKVVSLFIHD RRVDLKILNY KGFTALDAAE DHMATIPSLQ
401: EWLIWMALVA AGTTRAPRVH LRADIPGLTT DEDLILKIHK DRVNTLLVVA TLVATMAFAA GLSVPLGYNS TEFKSNVKHS YEESAFHAFV ICNSIAVYTA
501: VISTVALIGT QLADLKCMLT TFKFIVPLLG FSIIAMSLAF VAGLYLVLGH HYWLAIFVLA SGGFYLMALL LLIIPYASPY TFTLSRSLNS LVQNMSKEDV
601: DSVNQLVPAP TEELALIKAI QVNRCIQGNI GVTSMMVPRK HTHNFRVPVL VARQQNNSGL TALDIAELNP NPTTSFERNR LRVWLCVFSC FGISYRQLGA
701: TVQFFICEKT
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G03490]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.