Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021169_P002 Maize cytosol 96.44 94.59
Os09t0518500-01 Rice cytosol 89.68 89.68
HORVU5Hr1G079730.3 Barley cytosol 86.12 85.66
TraesCS5D01G312200.1 Wheat cytosol 85.94 85.49
TraesCS5B01G305700.1 Wheat cytosol 85.41 84.96
TraesCS5A01G305200.1 Wheat cytosol 85.41 84.96
EES15259 Sorghum cytosol 82.03 82.03
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome, plasma membrane 70.82 68.98
GSMUA_Achr7P23730_001 Banana cytosol 36.83 65.3
KRG97307 Soybean cytosol 62.46 62.9
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane, plastid 72.6 62.77
KRH69034 Soybean cytosol 62.46 62.01
KRH27553 Soybean cytosol, peroxisome, plasma membrane 27.94 61.81
CDY58363 Canola cytosol 59.43 60.07
VIT_05s0094g01320.t01 Wine grape cytosol 62.28 59.93
PGSC0003DMT400064924 Potato cytosol 58.72 59.89
Solyc12g019060.1.1 Tomato cytosol 60.32 59.47
PGSC0003DMT400052568 Potato cytosol 60.32 59.37
Solyc08g014570.2.1 Tomato cytosol, peroxisome, plasma membrane 59.07 59.07
CDY15549 Canola cytosol 57.65 58.06
PGSC0003DMT400075256 Potato cytosol 57.83 57.73
Solyc12g096670.1.1 Tomato cytosol 58.72 57.49
CDY19113 Canola cytosol 60.68 54.04
KRH64845 Soybean cytosol 52.85 53.71
Bra030618.1-P Field mustard cytosol 58.19 53.43
Bra021752.1-P Field mustard cytosol 61.21 52.84
AT1G05640.1 Thale cress cytosol 57.83 51.83
CDY42071 Canola cytosol, nucleus, plasma membrane, plastid 56.76 51.29
AT2G31820.1 Thale cress cytosol, nucleus, plasma membrane 60.32 51.21
CDY34515 Canola cytosol, nucleus, plasma membrane, plastid 56.58 50.72
Bra005639.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 54.8 49.92
CDX86566 Canola cytosol 50.53 49.22
EER95066 Sorghum cytosol 48.93 48.5
EES07299 Sorghum cytosol, plasma membrane 41.28 43.86
EES03848 Sorghum cytosol 39.15 39.57
EER95067 Sorghum cytosol, nucleus, plasma membrane 40.04 32.7
OQU83151 Sorghum cytosol 6.41 24.66
OQU83144 Sorghum cytosol 15.66 21.89
KXG28091 Sorghum cytosol, peroxisome, plasma membrane 21.71 20.54
OQU79686 Sorghum cytosol, peroxisome, plasma membrane 19.75 20.18
KXG36379 Sorghum cytosol 14.06 19.8
EER90917 Sorghum cytosol, peroxisome, plasma membrane 19.22 19.42
EER90916 Sorghum cytosol 18.33 18.23
OQU83029 Sorghum cytosol, peroxisome, plasma membrane 21.53 17.9
OQU83143 Sorghum cytosol 11.03 17.77
EER97319 Sorghum plastid 20.82 17.73
OQU89270 Sorghum cytosol 17.44 17.44
OQU80298 Sorghum mitochondrion, plastid 21.53 17.41
KXG28826 Sorghum cytosol, peroxisome, plasma membrane 12.46 17.28
KXG27928 Sorghum plasma membrane 20.28 17.17
KXG28374 Sorghum cytosol, peroxisome, plasma membrane 19.57 16.82
OQU84849 Sorghum plasma membrane 18.68 16.48
OQU84108 Sorghum cytosol, nucleus, plasma membrane 22.06 16.29
EER89595 Sorghum cytosol 10.85 16.14
KXG24315 Sorghum cytosol, peroxisome, plasma membrane 17.44 15.88
EES18294 Sorghum plasma membrane 19.57 15.74
KXG21092 Sorghum cytosol, peroxisome, plasma membrane 17.08 15.31
KXG36384 Sorghum cytosol 10.85 15.29
OQU78058 Sorghum plasma membrane 16.9 15.18
EER88274 Sorghum cytosol 19.22 14.25
EER87700 Sorghum cytosol 18.86 13.15
EER87702 Sorghum nucleus 17.08 13.04
EER96593 Sorghum plasma membrane 11.03 12.81
KXG28093 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 20.11 12.1
OQU83139 Sorghum cytosol 4.45 11.16
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:8059013InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
UniProt:C5X5G9EnsemblPlants:EER97054ProteinID:EER97054ProteinID:EER97054.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR002110InterPro:IPR020683
InterPro:IPR036770PFAM:PF12796PFAM:PF13962InterPro:PGG_domPFscan:PS50088PFscan:PS50297
PANTHER:PTHR24186PANTHER:PTHR24186:SF5SMART:SM00248EnsemblPlantsGene:SORBI_3002G266000SUPFAM:SSF48403unigene:Sbi.9598
TMHMM:TMhelixUniParc:UPI0001A83909RefSeq:XP_002460533.1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:65083086..65087503
Molecular Weight (calculated)
61629.0 Da
IEP (calculated)
8.987
GRAVY (calculated)
-0.031
Length
562 amino acids
Sequence
(BLAST)
001: MDKQSSTRHG TLEKLKSFRG IEKQRSFKFL SMEKQQSFKR NKDSPGKRGD TELHLAARAG SVAHVQRILA ECDPELVVEL AARQNQDGET ALYVSAEKGH
101: VEVVCEILKA SDVQSAGLKA SNSFDAFHIA AKQGHLDVLK ELLQAFPSLA MTTNSVNATA LDTAATQGHI DIVNLLLETD ASLARIARNN GKTVLHSAAR
201: MGHVEVVTAL LNKDPGIGFR TDKKGQTALH MASKGQNAEI LLELLKPDVS VIHVEDGKGN RPLHVATRKG NTIMVQTLIS VEGIEINAVN RAGETAFAIA
301: EKQGNEELIN ILREVGGETA KEQVNPPNPA KQLKQTVSDI RHDVQSQIKQ TRQTKMQFQK IKKRIQKLHI GGLNNAINSN TVVAVLIATV AFAAIFQLPG
401: NFLEDITQAP YPDMTLGQAL IASDPAFIIF LVFDALALFI SLAVVVVQTS LIVVEQKAKK KMVFVINKLM WLACLCISAA FIALTYVVVG RDDEWLAWCT
501: MAIGTVIMVA TLGSMCYCIV AHRMEEKSMR KIRRTSTSQS FSISIDSETE LMNSEYKKMY AL
Best Arabidopsis Sequence Match ( AT2G31820.1 )
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.