Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 87.01 | 92.6 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 87.61 | 92.5 |
| Bra005639.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 85.95 | 92.22 |
| AT1G05640.1 | Thale cress | cytosol | 78.1 | 82.46 |
| KRG97307 | Soybean | cytosol | 64.05 | 75.99 |
| KRH69034 | Soybean | cytosol | 64.35 | 75.27 |
| VIT_05s0094g01320.t01 | Wine grape | cytosol | 65.71 | 74.49 |
| KRH27553 | Soybean | cytosol, peroxisome, plasma membrane | 28.1 | 73.23 |
| Solyc12g019060.1.1 | Tomato | cytosol | 60.88 | 70.7 |
| Solyc12g096670.1.1 | Tomato | cytosol | 60.88 | 70.21 |
| PGSC0003DMT400052568 | Potato | cytosol | 60.42 | 70.05 |
| PGSC0003DMT400075256 | Potato | cytosol | 58.91 | 69.27 |
| PGSC0003DMT400064924 | Potato | cytosol | 57.25 | 68.78 |
| Solyc08g014570.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.85 | 68.15 |
| GSMUA_Achr7P23720_001 | Banana | cytosol, peroxisome, plasma membrane | 23.57 | 66.67 |
| KRH64845 | Soybean | cytosol | 55.14 | 66.0 |
| TraesCS7B01G166600.1 | Wheat | cytosol | 51.96 | 62.55 |
| TraesCS7D01G268900.1 | Wheat | cytosol | 51.81 | 62.36 |
| HORVU7Hr1G056430.1 | Barley | cytosol | 51.81 | 62.25 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, peroxisome, plasma membrane | 54.23 | 62.22 |
| TraesCS7A01G265800.1 | Wheat | cytosol | 51.36 | 61.82 |
| Os08t0542700-01 | Rice | cytosol | 51.66 | 61.4 |
| EES15259 | Sorghum | cytosol | 52.11 | 61.39 |
| Zm00001d031706_P001 | Maize | cytosol | 51.36 | 60.61 |
| EER97054 | Sorghum | cytosol | 51.21 | 60.32 |
| Zm00001d006142_P002 | Maize | cytosol | 51.06 | 60.14 |
| Zm00001d006147_P002 | Maize | cytosol | 51.06 | 60.14 |
| TraesCS5B01G305700.1 | Wheat | cytosol | 51.06 | 59.82 |
| TraesCS5D01G312200.1 | Wheat | cytosol | 50.91 | 59.65 |
| Os09t0518500-01 | Rice | cytosol | 50.6 | 59.61 |
| Zm00001d021169_P002 | Maize | cytosol | 51.51 | 59.51 |
| HORVU5Hr1G079730.3 | Barley | cytosol | 50.76 | 59.47 |
| TraesCS5A01G305200.1 | Wheat | cytosol | 50.45 | 59.12 |
| GSMUA_Achr7P23730_001 | Banana | cytosol | 27.19 | 56.78 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 46.22 | 56.35 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plasma membrane, plastid | 55.29 | 56.31 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 46.22 | 55.84 |
| AT5G02620.5 | Thale cress | cytosol | 39.73 | 48.08 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 33.69 | 41.92 |
| AT3G12360.1 | Thale cress | cytosol | 35.2 | 39.49 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 35.5 | 38.27 |
| AT1G10340.1 | Thale cress | cytosol | 19.18 | 21.97 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 19.49 | 21.46 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 18.43 | 21.29 |
| AT5G54710.2 | Thale cress | cytosol | 20.09 | 20.68 |
| AT5G50140.1 | Thale cress | plasma membrane | 16.62 | 20.56 |
| AT5G54700.1 | Thale cress | cytosol | 13.29 | 18.33 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.62 | 17.86 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 16.77 | 17.02 |
| AT4G03460.1 | Thale cress | peroxisome | 15.86 | 16.72 |
| AT4G05040.1 | Thale cress | cytosol | 14.35 | 16.61 |
| AT4G03450.1 | Thale cress | plasma membrane | 15.56 | 16.07 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 16.01 | 15.82 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 16.31 | 15.81 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 16.92 | 15.77 |
| AT4G14390.1 | Thale cress | plasma membrane | 16.01 | 15.27 |
| AT4G03480.1 | Thale cress | mitochondrion | 14.95 | 15.02 |
| AT4G03440.1 | Thale cress | cytosol | 14.8 | 13.05 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:817739 | UniProt:A0A178VYC8 | ProteinID:AAD32290.1 | ProteinID:AEC08589.1 |
| ArrayExpress:AT2G31820 | EnsemblPlantsGene:AT2G31820 | RefSeq:AT2G31820 | TAIR:AT2G31820 | RefSeq:AT2G31820-TAIR-G | EnsemblPlants:AT2G31820.1 |
| TAIR:AT2G31820.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_180741.1 | ProteinID:OAP10854.1 |
| PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24186 |
| PANTHER:PTHR24186:SF8 | UniProt:Q9SKB8 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI000009DE06 |
| SEG:seg | : | : | : | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKB8]
Coordinates
chr2:+:13529766..13533348
Molecular Weight (calculated)
73142.1 Da
IEP (calculated)
10.141
GRAVY (calculated)
-0.223
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIMEEKQNN SPVGEKQQSF NGIIINQTQE NQTKSMEKQQ SFRCVVENQP RKARALEKQV SFQGVNVENY QQSRLGRSME KQQSFRGVNV ENHKRGVMEK
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
101: LPSFGRATME RQKSFRGGFL EKQKSFRVVM ERQLSFIGER RKKNESPGKR GDSSLHIAAR TGNLSKVKEL IRGCGDELKE LLSKQNLEGE TPLYTAAENG
201: HSIVVEEMLK HMDLETASIA ARNGFDPFHV AAKQGHLEVL KILLETFPNL AMTTDLSCTT ALHTAATQGH IDVVNLLLET DSNLAKIAKN NGKTALHSAA
301: RMGHVEVVKS LIGKDPSIGF RTDKKGQTAL HMAVKGQNDG IVVELVKPDV AVLSVEDNKG NTPLHIATNK GRIKIVRCLV SFEGINLNPI NKAGDTPLDV
401: SEKIGNAELV SVLKEAGAAT AKDLGKPQNP AKQLKQTVSD IKHEVQSQLQ QSRQTGVRVQ KIAKRLKKLH ISGLNNAINS ATVVAVLIAT VAFAAIFTIP
501: GQYEEDRSKG ELLGQAHIAN KAPFLVFFIF DSLALFISLA VVVVQTSVVV IEQKAKKKLV FVINKLMWCA CLFISIAFVS LSYIVVGKEE MWLAVCATVI
601: GGTIMLTTIG AMCYCVVMHR MEESKLRSIR KERSKSQSFS MSRMPSDSDI LNGEYNKRMY AL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.