Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034760.1-P | Field mustard | cytosol | 95.59 | 96.41 |
| CDY42145 | Canola | cytosol | 95.59 | 96.41 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 93.39 | 95.49 |
| CDY50335 | Canola | cytosol | 95.08 | 95.25 |
| CDY50551 | Canola | cytosol | 94.75 | 94.91 |
| CDY08436 | Canola | cytosol | 95.76 | 85.61 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 78.98 | 79.12 |
| KRG92972 | Soybean | cytosol | 77.63 | 78.29 |
| KRH36223 | Soybean | cytosol | 78.14 | 77.87 |
| GSMUA_Achr11P... | Banana | cytosol | 64.07 | 76.99 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 66.44 | 76.86 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 68.14 | 76.43 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 70.34 | 74.37 |
| GSMUA_Achr6P34410_001 | Banana | cytosol | 63.39 | 73.33 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 67.97 | 73.31 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 70.51 | 67.75 |
| Zm00001d042948_P001 | Maize | cytosol | 61.19 | 64.81 |
| EES03848 | Sorghum | cytosol | 61.02 | 64.75 |
| Os01t0837000-01 | Rice | cytosol | 60.68 | 64.39 |
| HORVU3Hr1G087050.1 | Barley | cytosol | 60.34 | 64.38 |
| TraesCS3A01G354800.1 | Wheat | cytosol | 60.51 | 64.32 |
| TraesCS3B01G387800.2 | Wheat | cytosol | 60.17 | 64.08 |
| TraesCS3D01G348800.2 | Wheat | cytosol | 60.0 | 63.78 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 71.86 | 62.17 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 72.2 | 61.92 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 72.03 | 61.42 |
| Zm00001d047772_P002 | Maize | plastid | 72.2 | 61.21 |
| TraesCS4B01G202400.2 | Wheat | cytosol, nucleus, plasma membrane | 71.69 | 60.95 |
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 71.53 | 60.72 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 72.03 | 60.11 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 71.53 | 58.45 |
| AT5G60070.1 | Thale cress | cytosol, plastid | 42.2 | 45.44 |
| AT1G07710.1 | Thale cress | cytosol, peroxisome, plasma membrane | 40.68 | 44.2 |
| AT2G01680.1 | Thale cress | cytosol, plasma membrane | 35.42 | 39.29 |
| AT5G02620.5 | Thale cress | cytosol | 36.27 | 39.12 |
| AT1G05640.1 | Thale cress | cytosol | 39.66 | 37.32 |
| GSMUA_Achr9P03090_001 | Banana | cytosol | 51.86 | 36.56 |
| AT2G31820.1 | Thale cress | cytosol, nucleus, plasma membrane | 39.49 | 35.2 |
| AT1G10340.1 | Thale cress | cytosol | 19.83 | 20.24 |
| AT1G34050.1 | Thale cress | cytosol, peroxisome, plasma membrane | 18.47 | 19.02 |
| AT1G03670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 19.66 | 18.83 |
| AT4G03460.1 | Thale cress | peroxisome | 19.66 | 18.47 |
| AT2G24600.4 | Thale cress | cytosol, peroxisome, plasma membrane | 18.64 | 18.3 |
| AT5G54710.2 | Thale cress | cytosol | 19.49 | 17.88 |
| AT5G50140.1 | Thale cress | plasma membrane | 15.93 | 17.57 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 18.98 | 17.18 |
| AT4G03450.1 | Thale cress | plasma membrane | 18.47 | 17.0 |
| AT4G05040.1 | Thale cress | cytosol | 15.93 | 16.43 |
| AT5G54700.1 | Thale cress | cytosol | 13.22 | 16.25 |
| AT4G03470.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 18.31 | 15.81 |
| AT4G14400.1 | Thale cress | cytosol, nucleus, peroxisome | 17.12 | 15.07 |
| AT4G03490.3 | Thale cress | cytosol, peroxisome, plasma membrane | 17.12 | 14.23 |
| AT4G14390.1 | Thale cress | plasma membrane | 16.27 | 13.83 |
| AT4G03480.1 | Thale cress | mitochondrion | 15.08 | 13.51 |
| AT4G03440.1 | Thale cress | cytosol | 16.44 | 12.92 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:820414 | ProteinID:AAG51002.1 | ProteinID:AEE75188.1 | ProteinID:ANM64826.1 |
| ArrayExpress:AT3G12360 | EnsemblPlantsGene:AT3G12360 | RefSeq:AT3G12360 | TAIR:AT3G12360 | RefSeq:AT3G12360-TAIR-G | EnsemblPlants:AT3G12360.1 |
| TAIR:AT3G12360.1 | EMBL:AY085485 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.39610 |
| ProteinID:BAB03143.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034613 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | Symbol:ITN1 | RefSeq:NP_001326831.1 |
| RefSeq:NP_187842.1 | ProteinID:OAP02599.1 | PFAM:PF00023 | PFAM:PF12796 | PFAM:PF13962 | InterPro:PGG_dom |
| PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009015 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 |
| UniProt:Q9C7A2 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | UniParc:UPI00000A4B20 | SEG:seg |
Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
Coordinates
chr3:+:3934000..3936758
Molecular Weight (calculated)
64139.1 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.170
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.