CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36223	Soybean	cytosol	95.9	94.76
VIT_13s0067g03880.t01	Wine grape	cytosol	79.83	79.29
CDY42145	Canola	cytosol	77.78	77.78
Bra038714.1-P	Field mustard	cytosol, plastid	76.58	77.64
AT3G12360.1	Thale cress	cytosol	78.29	77.63
Bra034760.1-P	Field mustard	cytosol	77.61	77.61
GSMUA_Achr9P04170_001	Banana	cytosol	67.35	77.25
GSMUA_Achr5P07190_001	Banana	cytosol	69.23	77.0
CDY50335	Canola	cytosol	77.44	76.91
GSMUA_Achr11P...	Banana	cytosol	64.44	76.78
CDY50551	Canola	cytosol	77.09	76.57
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	71.62	75.09
GSMUA_Achr6P34410_001	Banana	cytosol	64.44	73.92
GSMUA_Achr6P33220_001	Banana	cytosol	67.86	72.58
CDY08436	Canola	cytosol	77.61	68.79
KRH67581	Soybean	cytosol, plastid	67.52	68.34
Os01t0837000-01	Rice	cytosol	63.76	67.09
HORVU3Hr1G087050.1	Barley	cytosol	63.25	66.91
TraesCS3A01G354800.1	Wheat	cytosol	63.42	66.85
KRG95863	Soybean	cytosol, plastid	66.32	66.78
TraesCS3B01G387800.2	Wheat	cytosol	63.08	66.61
TraesCS3D01G348800.2	Wheat	cytosol	62.73	66.13
Zm00001d042948_P001	Maize	cytosol	62.91	66.07
EES03848	Sorghum	cytosol	62.73	66.01
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	71.28	61.14
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	71.45	60.23
EER95067	Sorghum	cytosol, nucleus, plasma membrane	70.77	60.17
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	71.45	60.14
Zm00001d047772_P002	Maize	plastid	71.28	59.91
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	70.6	59.68
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	71.79	59.41
TraesCS4A01G102200.2	Wheat	nucleus	71.62	58.03
KRG88671	Soybean	cytosol, plastid	44.27	47.18
KRH25003	Soybean	cytosol, plastid	44.1	47.08
KRH22984	Soybean	cytosol	43.59	46.79
KRH10329	Soybean	cytosol	43.59	46.79
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	40.68	44.91
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	19.49	44.88
KRH67582	Soybean	cytosol	39.66	44.53
KRH69034	Soybean	cytosol	41.71	43.11
KRG97307	Soybean	cytosol	41.03	43.01
KRH49636	Soybean	cytosol	37.61	41.9
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	36.75	40.95
KRH60413	Soybean	cytosol	36.07	39.81
KRH41712	Soybean	cytosol	35.9	39.77
KRH64845	Soybean	cytosol	36.92	39.06
GSMUA_Achr9P03090_001	Banana	cytosol	50.77	35.48
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	25.3	22.87
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	21.37	19.35
KRH55981	Soybean	cytosol	19.66	19.23
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	21.88	19.19
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	21.37	19.03
KRH25567	Soybean	plasma membrane	20.34	18.59
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	20.17	17.99
KRH55984	Soybean	cytosol	19.66	17.32
KRH42265	Soybean	cytosol	17.61	16.69
KRH50654	Soybean	cytosol	5.47	13.85
KRH55979	Soybean	mitochondrion, nucleus	4.96	13.18
KRH33072	Soybean	cytosol	5.13	12.93
KRH55986	Soybean	cytosol	5.64	12.84
KRH58386	Soybean	cytosol	18.29	10.38

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100802596	MapMan:35.1	EMBL:ACUP02012777	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_20G241200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	UniProt:I1NJ65	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
EnsemblPlants:KRG92972	ProteinID:KRG92972	ProteinID:KRG92972.1	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403
TMHMM:TMhelix	UniParc:UPI000233DE27	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:47227021..47230994

Molecular Weight (calculated)

63581.1 Da

IEP (calculated)

9.231

GRAVY (calculated)

-0.227

Length

585 amino acids

Sequence
(BLAST)

001: MASHSNQPGP GAEGQGEKDP FCEISPSPSP SSATAPALVL SNSGKRIDQA GKKKYVKQVT GRHNDTELHL AAQRGDVGAV RQILEDVDSQ IMRTLSGGDD
101: DVDLNAEIAE VRACLVNEEN EPGETPLFTA AEKGHLDVVK ELLNYSNAQT VSKKNRSGFD PLHIAASQGH HSIVQVLLDY NPGLSKTIGP SNSTPLITAA
201: TRGHTEVVNE LLSKDCSLLE IARSNGKNAL HLAARQGHVE IVKALLSKDP QLARRTDKKG QTALHMAVKG QSCDVVKLLL EADAAIVMLP DKFGNTALHV
301: ATRKKRVEIV NELLHLPDTN VNALTRDHKT ALDIAENLPL SEEASDIKDC LSRYGALRAN ELNQPRDELR KTVTQIKKDV HTQLEQTKRT NKNVHNISKE
401: LRKLHREGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD DGSAVVAAYA AFKIFFVFNA IALFTSLAVV VVQITLVRGE TKAEKRVVEV INKLMWLASV
501: CTSVAFIASS YIVVGRKNKW AAILVTLVGG VIISGVIGTM TYYVVRSKRS RSMRKKEKQA ARRSGSNSWH HSEFSNSEVD RIYAL

Best Arabidopsis Sequence Match ( AT3G12360.1 )
(BLAST)

001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI

Arabidopsis Description

ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.