Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G058480.2 | Barley | cytosol, nucleus, plasma membrane | 97.69 | 97.55 |
| TraesCS4D01G203300.1 | Wheat | cytosol, nucleus, plasma membrane | 99.14 | 97.31 |
| TraesCS4A01G102200.2 | Wheat | nucleus | 99.14 | 95.29 |
| Os03t0281000-01 | Rice | nucleus, peroxisome, plasma membrane | 87.75 | 89.3 |
| Zm00001d028679_P002 | Maize | cytosol, nucleus, plasma membrane | 86.02 | 86.27 |
| EER95067 | Sorghum | cytosol, nucleus, plasma membrane | 84.87 | 85.61 |
| Zm00001d047772_P002 | Maize | plastid | 85.45 | 85.2 |
| GSMUA_Achr11P... | Banana | cytosol | 58.36 | 82.48 |
| GSMUA_Achr9P04170_001 | Banana | cytosol | 59.8 | 81.37 |
| GSMUA_Achr7P15350_001 | Banana | cytosol, plastid | 64.55 | 80.29 |
| GSMUA_Achr5P07190_001 | Banana | cytosol | 60.81 | 80.23 |
| GSMUA_Achr6P33220_001 | Banana | cytosol | 61.24 | 77.7 |
| PGSC0003DMT400060447 | Potato | cytosol, nucleus, plasma membrane | 61.53 | 73.12 |
| CDY42145 | Canola | cytosol | 61.38 | 72.82 |
| Bra034760.1-P | Field mustard | cytosol | 61.24 | 72.65 |
| Solyc05g054830.2.1 | Tomato | nucleus | 60.81 | 72.26 |
| Bra038714.1-P | Field mustard | cytosol, plastid | 59.8 | 71.92 |
| AT3G12360.1 | Thale cress | cytosol | 60.95 | 71.69 |
| KRG92972 | Soybean | cytosol | 60.23 | 71.45 |
| VIT_08s0040g02750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 65.56 | 71.32 |
| CDY50551 | Canola | cytosol | 60.52 | 71.31 |
| CDY50335 | Canola | cytosol | 60.52 | 71.31 |
| VIT_13s0067g03880.t01 | Wine grape | cytosol | 60.52 | 71.31 |
| KRH36223 | Soybean | cytosol | 59.37 | 69.59 |
| TraesCS3B01G387800.2 | Wheat | cytosol | 55.19 | 69.13 |
| CDY07932 | Canola | nucleus, plastid | 58.79 | 68.11 |
| AT3G09550.2 | Thale cress | cytosol, nucleus, plasma membrane | 59.8 | 67.59 |
| Bra001304.1-P | Field mustard | nucleus | 59.08 | 67.32 |
| CDX73985 | Canola | nucleus | 59.08 | 67.32 |
| Solyc10g084550.1.1 | Tomato | plastid | 54.61 | 64.79 |
| CDY08436 | Canola | cytosol | 61.24 | 64.39 |
| PGSC0003DMT400028722 | Potato | cytosol, plastid | 56.05 | 63.77 |
| TraesCS4B01G202300.1 | Wheat | cytosol | 34.73 | 44.63 |
| TraesCS7B01G166600.1 | Wheat | cytosol | 34.15 | 43.09 |
| TraesCS6B01G327600.1 | Wheat | cytosol | 31.27 | 41.33 |
| TraesCS5B01G305700.1 | Wheat | cytosol | 31.99 | 39.29 |
| TraesCS2B01G623000.1 | Wheat | peroxisome, plasma membrane, vacuole | 7.06 | 25.13 |
| TraesCS5B01G352200.1 | Wheat | cytosol | 7.93 | 24.55 |
| TraesCS4B01G390300.1 | Wheat | cytosol, peroxisome, plasma membrane | 9.08 | 24.42 |
| TraesCS3B01G598900.1 | Wheat | cytosol | 13.69 | 23.28 |
| TraesCS3B01G599300.1 | Wheat | plasma membrane, vacuole | 6.92 | 22.64 |
| TraesCS7B01G317700.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.01 | 21.93 |
| TraesCS6B01G437600.1 | Wheat | cytosol | 17.58 | 21.59 |
| TraesCS3B01G598800.1 | Wheat | cytosol | 5.19 | 20.81 |
| TraesCS3B01G598700.3 | Wheat | cytosol, peroxisome, plasma membrane | 17.29 | 20.65 |
| TraesCS6B01G013100.1 | Wheat | cytosol, mitochondrion, plasma membrane | 16.71 | 20.42 |
| TraesCS3B01G584200.1 | Wheat | plasma membrane | 14.7 | 20.4 |
| TraesCS6B01G013000.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.71 | 20.28 |
| TraesCS5B01G183200.1 | Wheat | cytosol | 19.31 | 20.0 |
| TraesCS2B01G243500.1 | Wheat | cytosol | 12.39 | 19.86 |
| TraesCS6B01G460200.1 | Wheat | cytosol | 11.82 | 19.62 |
| TraesCS5B01G352700.1 | Wheat | plasma membrane | 12.39 | 19.5 |
| TraesCS5B01G038100.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.87 | 19.41 |
| TraesCS5B01G439300.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.29 | 19.39 |
| TraesCS4B01G004400.1 | Wheat | cytosol, peroxisome, plasma membrane | 10.37 | 19.25 |
| TraesCS1B01G012300.1 | Wheat | peroxisome | 16.71 | 19.11 |
| TraesCS2B01G007300.1 | Wheat | cytosol | 15.56 | 19.05 |
| TraesCS3B01G599400.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.42 | 18.94 |
| TraesCS3B01G599200.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 15.71 | 18.7 |
| TraesCS5B01G337600.1 | Wheat | plasma membrane | 17.72 | 18.52 |
| TraesCS5B01G336900.1 | Wheat | cytosol | 17.0 | 18.5 |
| TraesCS2B01G244900.5 | Wheat | plastid | 17.15 | 18.28 |
| TraesCS1B01G392900.2 | Wheat | cytosol, peroxisome, plasma membrane | 13.83 | 18.22 |
| TraesCS3B01G046200.1 | Wheat | cytosol, peroxisome, vacuole | 16.43 | 17.98 |
| TraesCS4B01G359100.1 | Wheat | plasma membrane | 16.57 | 17.64 |
| TraesCS3B01G599100.1 | Wheat | cytosol | 10.23 | 17.62 |
| TraesCS7B01G025200.1 | Wheat | nucleus | 16.14 | 17.58 |
| TraesCS7B01G025100.1 | Wheat | nucleus | 16.14 | 17.58 |
| TraesCS6B01G466500.1 | Wheat | plasma membrane | 14.7 | 17.5 |
| TraesCS3B01G504500.1 | Wheat | cytosol | 9.37 | 17.06 |
| TraesCS3B01G523100.1 | Wheat | plasma membrane | 16.43 | 16.91 |
| TraesCS6B01G460800.1 | Wheat | plasma membrane | 15.42 | 16.8 |
| TraesCS6B01G461800.1 | Wheat | cytosol | 17.0 | 16.76 |
| TraesCS6B01G448200.1 | Wheat | nucleus, peroxisome, plasma membrane | 16.86 | 16.36 |
| TraesCS6B01G460400.1 | Wheat | plasma membrane | 17.15 | 16.32 |
| TraesCS3B01G000900.1 | Wheat | cytosol, peroxisome, plasma membrane | 11.24 | 16.15 |
| TraesCS2B01G008500.1 | Wheat | cytosol, peroxisome, plasma membrane | 17.0 | 16.08 |
| TraesCS5B01G352400.1 | Wheat | cytosol | 16.71 | 16.04 |
| TraesCS1B01G032300.1 | Wheat | plastid | 16.57 | 16.04 |
| TraesCS3B01G598600.1 | Wheat | mitochondrion | 14.7 | 15.99 |
| TraesCS3B01G391000.2 | Wheat | cytosol | 16.71 | 15.93 |
| TraesCS1B01G095300.1 | Wheat | plasma membrane | 13.4 | 15.82 |
| TraesCS3B01G584300.1 | Wheat | cytosol | 9.8 | 15.42 |
| TraesCS5B01G352100.1 | Wheat | cytosol | 15.56 | 14.79 |
| TraesCS5B01G352300.1 | Wheat | plasma membrane | 16.71 | 14.68 |
| TraesCS5B01G352800.1 | Wheat | cytosol | 11.53 | 13.94 |
| TraesCS6B01G460500.1 | Wheat | plasma membrane, plastid | 17.58 | 13.69 |
| TraesCS3B01G071300.1 | Wheat | cytosol | 4.61 | 12.5 |
| TraesCS2B01G051900.4 | Wheat | cytosol | 14.27 | 12.3 |
| TraesCS6B01G320600.1 | Wheat | cytosol | 4.9 | 9.88 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF12796 |
| PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF107 |
| SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G202400 | EnsemblPlants:TraesCS4B01G202400.2 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:433333104..433335786
Molecular Weight (calculated)
74640.0 Da
IEP (calculated)
10.460
GRAVY (calculated)
-0.162
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVDSDRGEG DLEIGLASPG SEGGVSPVAP GRRALESCLS GKRLDQSPSP SRAVRRPALV MSSSGKRLDQ SPSPSRPVLA MSRSSNRLDQ PPGRPVLAMS
101: RSSNRLDHSP ASSSSPTPAK GPALVMSGSS KRLEQSLASP SPSPKAGAAA PPVLVLSNSG KRMDQAGRKK YVKQVTGRHN DTELHLAAQR GDLDAVRQII
201: AEIDAQMTGT GEEFDSEVAE IRAAVLNEPN EVGETALLIA AEKGFIDVVV ELLKHSDKES LARKNKSGFD ALHVAAKEGH RDIVKVLLDH DPSLGKTFGQ
301: SNVTPLITAA IRGHLEVVNL LLERVSGLVE LSKANGKNAL HFAARQGHVE IVKSLLVSEA QLARKTDKKG QTALHMAVKG TSAAVVRALV NADPAIVMLP
401: DKNGNLALHV ATRKKRSEIV NELLLLPDMN VNALTRDRKT AFDIAEGLPL SEESADIKDC LSRAGAVRAN DLNQPRDELR KTVTEIKKDV HTQLEQARKT
501: NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA IFTVPGGNDD HGVAIVVHAV SFKVFFIFNA IALFTSLAVV VVQITLVRGE TKAERRVVEV
601: INKLMWLASV CTTVAFISSS YIVVGRHFKW AAMLVTLIGG VIMASVLGTM TYYVVKSKRT RSIRKKVKST RRSGSNSWNH NSESDSEIDR IYAI
101: RSSNRLDHSP ASSSSPTPAK GPALVMSGSS KRLEQSLASP SPSPKAGAAA PPVLVLSNSG KRMDQAGRKK YVKQVTGRHN DTELHLAAQR GDLDAVRQII
201: AEIDAQMTGT GEEFDSEVAE IRAAVLNEPN EVGETALLIA AEKGFIDVVV ELLKHSDKES LARKNKSGFD ALHVAAKEGH RDIVKVLLDH DPSLGKTFGQ
301: SNVTPLITAA IRGHLEVVNL LLERVSGLVE LSKANGKNAL HFAARQGHVE IVKSLLVSEA QLARKTDKKG QTALHMAVKG TSAAVVRALV NADPAIVMLP
401: DKNGNLALHV ATRKKRSEIV NELLLLPDMN VNALTRDRKT AFDIAEGLPL SEESADIKDC LSRAGAVRAN DLNQPRDELR KTVTEIKKDV HTQLEQARKT
501: NKNVHGIAKE LRKLHREGIN NATNSVTVVA VLFATVAFAA IFTVPGGNDD HGVAIVVHAV SFKVFFIFNA IALFTSLAVV VVQITLVRGE TKAERRVVEV
601: INKLMWLASV CTTVAFISSS YIVVGRHFKW AAMLVTLIGG VIMASVLGTM TYYVVKSKRT RSIRKKVKST RRSGSNSWNH NSESDSEIDR IYAI
001: MAASSYVDGE RDMEKGGMIL LQSSENQNPM IDPSPTPSPS ATATAPALVL SNSGKRMDQA GKKKYVKQVT GRHNDTELHL AAQRGDLAAV QQILKDINSQ
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
101: MEGILSGEEF DAEVAEIRAS IVNEVNELGE TALFTAADKG HLDVVKELLK YSSRESIAKK NRSGYDPLHI AAIQGHHAIV EVLLDHDATL SQTFGPSNAT
201: PLVSAAMRGH TEVVNQLLSK AGNLLEISRS NNKNALHLAA RQGHVEVIKA LLSKDPQLAR RIDKKGQTAL HMAVKGQSSE VVKLLLDADP AIVMQPDKSC
301: NTALHVATRK KRAEIVELLL SLPDTNANTL TRDHKTALDI AEGLPLSEES SYIKECLARS GALRANELNQ PRDELRSTVT QIKNDVHIQL EQTKRTNKNV
401: HNISKELRKL HREGINNATN SVTVVAVLFA TVAFAAIFTV PGGDNNDGSA VVVGRASFKI FFIFNALALF TSLAVVVVQI TLVRGETKAE KRVVEVINKL
501: MWLASMCTSV AFLASSYIVV GRKNEWAAEL VTVVGGVIMA GVLGTMTYYV VKSKRTRSMR KKVKSARRSG SNSWHHSDFS NSEVDPIFAI
Arabidopsis Description
ITN1Ankyrin repeat-containing protein ITN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.