Factsheet for Bra001304.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73985	Canola	nucleus	100.0	100.0
CDY07932	Canola	nucleus, plastid	98.19	99.83
AT3G09550.2	Thale cress	cytosol, nucleus, plasma membrane	95.24	94.46
GSMUA_Achr5P07190_001	Banana	cytosol	64.7	74.9
GSMUA_Achr11P...	Banana	cytosol	59.93	74.34
GSMUA_Achr9P04170_001	Banana	cytosol	61.9	73.92
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.18	73.67
GSMUA_Achr7P15350_001	Banana	cytosol, plastid	66.5	72.58
GSMUA_Achr6P34410_001	Banana	cytosol	60.76	72.55
Bra038714.1-P	Field mustard	cytosol, plastid	68.47	72.27
Bra034760.1-P	Field mustard	cytosol	68.97	71.79
Solyc10g084550.1.1	Tomato	plastid	68.97	71.79
GSMUA_Achr6P33220_001	Banana	cytosol	63.38	70.57
PGSC0003DMT400028722	Potato	cytosol, plastid	69.95	69.84
EES03848	Sorghum	cytosol	59.77	65.47
Zm00001d042948_P001	Maize	cytosol	59.77	65.35
Os01t0837000-01	Rice	cytosol	59.11	64.75
TraesCS3A01G354800.1	Wheat	cytosol	58.95	64.68
HORVU3Hr1G087050.1	Barley	cytosol	58.46	64.38
TraesCS3B01G387800.2	Wheat	cytosol	58.46	64.26
TraesCS3D01G348800.2	Wheat	cytosol	58.46	64.14
Os03t0281000-01	Rice	nucleus, peroxisome, plasma membrane	67.32	60.12
TraesCS4B01G202400.2	Wheat	cytosol, nucleus, plasma membrane	67.32	59.08
Zm00001d047772_P002	Maize	plastid	67.49	59.05
HORVU4Hr1G058480.2	Barley	cytosol, nucleus, plasma membrane	67.32	58.99
Zm00001d028679_P002	Maize	cytosol, nucleus, plasma membrane	67.0	58.96
TraesCS4D01G203300.1	Wheat	cytosol, nucleus, plasma membrane	67.98	58.56
EER95067	Sorghum	cytosol, nucleus, plasma membrane	66.01	58.43
TraesCS4A01G102200.2	Wheat	nucleus	67.32	56.79
Bra018683.1-P	Field mustard	cytosol	38.59	43.6
Bra006680.1-P	Field mustard	plastid	38.92	43.41
Bra009576.1-P	Field mustard	cytosol	35.8	41.37
Bra024863.1-P	Field mustard	cytosol	33.83	38.65
Bra030618.1-P	Field mustard	cytosol	37.93	37.75
Bra021752.1-P	Field mustard	cytosol	38.75	36.25
GSMUA_Achr9P03090_001	Banana	cytosol	48.93	35.6
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	34.81	34.36
Bra029009.1-P	Field mustard	cytosol	15.27	21.04
Bra018444.1-P	Field mustard	cytosol	19.7	20.24
Bra018445.1-P	Field mustard	cytosol	19.7	20.13
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.39	19.44
Bra000823.1-P	Field mustard	plasma membrane	13.14	18.02
Bra023774.1-P	Field mustard	plasma membrane	17.73	17.7
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.03	17.52
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.08	16.99
Bra033416.1-P	Field mustard	cytosol	14.78	16.04
Bra034209.1-P	Field mustard	cytosol	16.42	16.03
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.26	13.81
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.76	13.62

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra001304	EnsemblPlants:Bra001304.1	EnsemblPlants:Bra001304.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4CAS5	PFAM:PF00023	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF107	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI0002540554	SEG:seg	:	:	:	:

Description

AT3G09550 (E=2e-281) | protein binding

Coordinates

chrA03:-:15765209..15768058

Molecular Weight (calculated)

66601.2 Da

IEP (calculated)

9.892

GRAVY (calculated)

-0.210

Length

609 amino acids

Sequence
(BLAST)

001: MGSRIQEEKE LEPDMEKGWA TDPVSPAGST VADLSSPTPT PRKTLVLSNS GKALMVSNSS KSLGLSNSGK RFDPTGKKKY VKQVTGRHND TELHLAAQRG
101: DLAAVKQILS DIDSQITGTI SGSDFDDEVA QIMTSVVNEV NELGETPLFT AAEKGNIDVV KELLCYTTKE SLMQKNLSGF DALHIACSQG HRAIVQLLLE
201: HEPLLSKTVA QSNATPLVSA ATRGHSEVVN ELLAKDSSLL EISRSNGKNA LHLAARQGHV DIVRTLLDKD PQLARRTDKK GQTSLHMAVK GISSEVVRLL
301: LRADPAIVML PDKFGNTVLH IATRKKRAEI VNELLQLPDT NVNALTRDHK TAYDIAEGLT HSEETQEIKE ILSRCGALKA NELNQPRDEL RKTVTEIKKD
401: VHTQLEQTRR TNKNVDGIAK ELRKLHRAGI NNATNSVTVV AVLFATVAFA AIFTVPGGDD DNGVAVMVHA TSFKIFFIFN AIALFTSLAV VVVQITLVRG
501: ETKTERRVVE VINKLMWLAS VCTSVAFISS SYIVVGRRNR YAAVVVTVIG TVTMTGILSI MTYYVVKSKR TRKVRKKEKK KKFGRTGTGS WHNANPSETE
601: SEVNPIYAI

Best Arabidopsis Sequence Match ( AT3G09550.3 )
(BLAST)

001: MGSRIEEEKE LEPGMEKGLA TDPTSPTGST VADLSPTPTP RKTLVLSNSG KALMVSNSSK SLGLSNSGKR FDPTGKKKYV KQVTGRHNDT ELHLAAQRGD
101: LASVKQILSD IDSQITGTIT GADFDDEVAQ IMTSVVNEVN ELGETPLFTA AEKGNIDVVK ELLPYTTIES LMQKNLSGFD ALHIACSQGH RSIVQLLLEH
201: EPQLSKTVAQ SNATPLVSAA TRGHSEVVNE LLAKDSSLLE ISRSNGKNAL HLAARQGHVD IVRTLLDKDP QLARRTDKKG QTSLHMAVKG VSSQVVRLLL
301: RADPAIVMLP DKFGNTVLHI ATRKKRAEIV NELLQLPDTN VNALTRDHKT AYDIAEGLTH SEETAEIKEI LSRCGALKAN ELNQPRDELR KTVTEIKKDV
401: HTQLEQTRKT NKNVDGIAKE LRKLHRAGIN NATNSVTVVA VLFATVAFAA IFTVPGGDDD HGVAVMVHAT SFKIFFIFNA IALFTSLAVV VVQITLVRGE
501: TKTERRVVEV INKLMWLASV CTTVAFISSS YIVVGRRNRY AAVVVTVIGT VTMTGILSIM TYYVVKSKRT RIVRKKEKKK SARNGTSSWH HANPSETESE
601: VNPIYAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLR6]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.