Factsheet for Bra032143.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39673	Canola	plasma membrane	88.22	46.17
CDY69308	Canola	plasma membrane	81.21	43.0
AT2G24600.4	Thale cress	cytosol, peroxisome, plasma membrane	66.88	34.94
Bra018444.1-P	Field mustard	cytosol	64.97	34.4
Bra018445.1-P	Field mustard	cytosol	61.15	32.21
Bra029009.1-P	Field mustard	cytosol	33.76	23.98
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	37.9	18.39
VIT_09s0002g03920.t01	Wine grape	cytosol	33.44	18.36
VIT_09s0002g03910.t01	Wine grape	plasma membrane	35.03	15.26
Bra018683.1-P	Field mustard	cytosol	19.43	11.32
Bra009576.1-P	Field mustard	cytosol	17.52	10.44
Bra006680.1-P	Field mustard	plastid	17.83	10.26
Bra038714.1-P	Field mustard	cytosol, plastid	18.79	10.23
Bra024863.1-P	Field mustard	cytosol	17.2	10.13
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	19.75	10.05
Bra034760.1-P	Field mustard	cytosol	18.47	9.91
Bra030618.1-P	Field mustard	cytosol	19.11	9.8
Bra021752.1-P	Field mustard	cytosol	19.75	9.52
Bra001304.1-P	Field mustard	nucleus	17.52	9.03
Bra000823.1-P	Field mustard	plasma membrane	10.51	7.43
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	12.74	6.54
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.15	6.08
Bra023774.1-P	Field mustard	plasma membrane	11.78	6.07
Bra034209.1-P	Field mustard	cytosol	11.15	5.61
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	9.87	4.4
Bra033416.1-P	Field mustard	cytosol	7.64	4.28
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	9.24	4.04

Protein Annotations

EnsemblPlants:Bra032143.1	EnsemblPlants:Bra032143.1-P	EnsemblPlantsGene:Bra032143	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	PFAM:PF13962	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025447C0	UniProt:M4ETL1	MapMan:35.2	:	:	:

Description

AT2G24600 (E=2e-096) | ankyrin repeat family protein

Coordinates

chrA04:-:10610323..10611267

Molecular Weight (calculated)

35193.8 Da

IEP (calculated)

10.069

GRAVY (calculated)

-0.035

Length

314 amino acids

Sequence
(BLAST)

001: MGFTAFDLLL QEAEDFELLS TLLRLDTKLD SDQSIEEQGE HSNPYNKGSQ EGVKSLDIPG SLKENEVIRL LRLIETNTSK IAHIKRNKKG AVERDRRSLE
101: REMHIEALQN ARNTIAIVAV LIASVSYAGG INPPGGVYDD GPWRGKSIVG NTTPFKVFAI CNNIALFTSL CIVILLVSII PYKRKPLKRL LVITHRMMWV
201: SVGFMATAYV AASWVTIPLL RGTRWLFPAI VSIAGGSLMV LFSYLGVETI SHWFKKMNRV GDIPVYFMQK WRVRDIPPIS RRTRVTSPDH SKASSFARTN
301: SDLAASENSG YFTY

Best Arabidopsis Sequence Match ( AT2G24600.4 )
(BLAST)

001: MHPIFDAILQ NDLPAFLGLV EARESSLEER SEEQNTNNTV LHVAAKLGHR ELVAKIIELR PSLLSSRNAY GDTPLHLAAL LGDVNIVMQM LDTGLELYSA
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IPR3]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.