CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03920.t01	Wine grape	cytosol	40.19	45.45
VIT_09s0002g03910.t01	Wine grape	plasma membrane	44.51	39.94
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.39	37.9
Bra029009.1-P	Field mustard	cytosol	25.81	37.78
CDY69308	Canola	plasma membrane	34.31	37.44
CDY20635	Canola	plasma membrane	33.69	37.39
AT1G10340.1	Thale cress	cytosol	33.23	37.2
Bra018445.1-P	Field mustard	cytosol	34.0	36.91
CDY39673	Canola	plasma membrane	33.23	35.83
AT1G34050.1	Thale cress	cytosol, peroxisome, plasma membrane	31.68	35.78
CDY20943	Canola	cytosol	31.68	35.65
Bra018444.1-P	Field mustard	cytosol	32.61	35.58
CDY20639	Canola	cytosol, peroxisome, plasma membrane	25.04	35.37
AT2G24600.4	Thale cress	cytosol, peroxisome, plasma membrane	32.3	34.78
AT5G50140.1	Thale cress	plasma membrane	27.36	33.08
AT5G54700.1	Thale cress	cytosol	23.34	31.46
AT5G54710.2	Thale cress	cytosol	28.9	29.08
KRG95864	Soybean	cytosol, peroxisome, plasma membrane	21.48	26.23
KRH67582	Soybean	cytosol	21.02	26.1
KRH25003	Soybean	cytosol, plastid	21.64	25.55
KRG92972	Soybean	cytosol	22.87	25.3
KRH69034	Soybean	cytosol	21.95	25.09
KRG88671	Soybean	cytosol, plastid	21.17	24.95
KRH22984	Soybean	cytosol	21.02	24.95
KRG97307	Soybean	cytosol	21.48	24.91
KRH36223	Soybean	cytosol	22.72	24.83
KRH10329	Soybean	cytosol	20.87	24.77
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	9.58	24.41
KRH67581	Soybean	cytosol, plastid	21.48	24.05
KRG95863	Soybean	cytosol, plastid	21.33	23.75
KRH41712	Soybean	cytosol	18.7	22.92
KRH64845	Soybean	cytosol	19.47	22.78
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	18.39	22.67
KRH49636	Soybean	cytosol	18.39	22.67
KRH60413	Soybean	cytosol	18.39	22.45
KRH25567	Soybean	plasma membrane	18.86	19.06
KRH42265	Soybean	cytosol	17.47	18.31
KRH55981	Soybean	cytosol	16.38	17.73
KRH25558	Soybean	cytosol, peroxisome, plasma membrane, plastid	17.47	17.49
KRH55987	Soybean	cytosol, peroxisome, plasma membrane	17.47	16.94
KRH55984	Soybean	cytosol	16.85	16.42
KRH55978	Soybean	cytosol, peroxisome, plasma membrane	16.54	16.31
KRH25555	Soybean	cytosol, peroxisome, plasma membrane	16.23	15.98
KRH55979	Soybean	mitochondrion, nucleus	4.64	13.64
KRH50654	Soybean	cytosol	4.79	13.42
KRH55986	Soybean	cytosol	5.26	13.23
CDY20642	Canola	nucleus	26.89	12.19
KRH33072	Soybean	cytosol	4.02	11.21
KRH58386	Soybean	cytosol	17.0	10.67

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:102660055	MapMan:35.1	EMBL:ACUP02009113	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_15G018600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
UniProt:I1MCT7	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH09919	ProteinID:KRH09919
ProteinID:KRH09919.1	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI00023D2381
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:1426925..1429405

Molecular Weight (calculated)

72032.4 Da

IEP (calculated)

8.510

GRAVY (calculated)

-0.211

Length

647 amino acids

Sequence
(BLAST)

001: MNPKFYNAVK SNDITTFLSL VKENGEILHQ ITADSLSTPL HLASRYGCTE IVSEIVRLCP DMVSAENKNL ETPIHEACRQ ENVGVLKLLL DANSTAICKL
101: NQNGKSACFL ACRHGNLDML NLLLNLSEMG GPEATGFDQS CIHIAASRGH TDVVRELLNK WSELTQVIDD NGNSPLHHAC NGGHREIAWI LLRRDPNLVL
201: QYNNNGYTPL HLAVMKGKVS VLQDFVSSIA TSLNHLTREE ETVFHLAVRY GLCDALEFLV HVSNGTNLLH FQDRYGNTVL HLAVLGGRYK MAEFLINKTK
301: VDVNARNCEG VTALDILDQA KDSAENRQLQ ATLIRAGGRR SIQSSPFSRE TDKTNSVSPV ASSLSMSWRY TTNPVELPNQ NEMVAYDCTS PPQLGRSTNS
401: RSPSQPQVSE RIEDTTYKSY YCSPRNLGKH KQQNKTKAEN LNQLYYTQSR RNKHYEMHKE AILNARNTIT IVAVLIATVT FAAGINPPGG VYQEGPMRGK
501: SMVGKTTAFK VFAISNNIAL FTSLSIVIVL VSIIPFRRKP QIRLLTITHK VMWVAVAFMA TGYVAGTWVI LPHSPEMQWL SVVLLAVGGG SLGTIFIGLS
601: VMLVDHWLRK SRWKKTMKES VDVAADYQKE SENSDFESSY LQGYHSY

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.