Factsheet for VIT_09s0002g03910.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03920.t01	Wine grape	cytosol	59.64	75.17
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	39.94	44.51
VIT_04s0008g03530.t01	Wine grape	cytosol	32.59	40.45
VIT_04s0008g03840.t01	Wine grape	cytosol	33.01	40.0
CDY20635	Canola	plasma membrane	31.62	39.11
AT1G10340.1	Thale cress	cytosol	31.35	39.1
Bra029009.1-P	Field mustard	cytosol	23.58	38.46
CDY39673	Canola	plasma membrane	31.76	38.17
AT2G24600.4	Thale cress	cytosol, peroxisome, plasma membrane	31.76	38.1
CDY69308	Canola	plasma membrane	31.21	37.94
Bra018445.1-P	Field mustard	cytosol	31.35	37.92
Bra018444.1-P	Field mustard	cytosol	31.07	37.77
CDY20639	Canola	cytosol, peroxisome, plasma membrane	23.99	37.77
CDY20943	Canola	cytosol	29.96	37.57
AT1G34050.1	Thale cress	cytosol, peroxisome, plasma membrane	29.4	37.0
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.26	35.03
AT5G50140.1	Thale cress	plasma membrane	25.24	34.02
AT5G54700.1	Thale cress	cytosol	21.91	32.92
AT5G54710.2	Thale cress	cytosol	26.49	29.7
VIT_05s0094g01320.t01	Wine grape	cytosol	20.25	25.0
VIT_06s0004g03980.t01	Wine grape	cytosol, nucleus, plasma membrane	17.61	23.43
VIT_08s0040g02760.t01	Wine grape	cytosol	17.48	23.29
VIT_12s0059g00130.t01	Wine grape	cytosol	12.21	23.1
VIT_13s0067g03880.t01	Wine grape	cytosol	18.86	23.09
VIT_12s0059g00110.t01	Wine grape	cytosol	11.79	21.96
VIT_14s0081g00350.t01	Wine grape	cytosol	16.23	21.91
VIT_08s0040g02750.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.14	21.63
VIT_12s0059g00090.t01	Wine grape	cytosol	10.68	21.45
VIT_01s0011g05700.t01	Wine grape	cytosol	15.81	21.43
VIT_12s0059g00150.t01	Wine grape	cytosol	11.23	20.93
VIT_12s0028g04020.t01	Wine grape	plasma membrane	9.15	20.75
VIT_12s0028g03960.t01	Wine grape	plasma membrane	11.93	20.67
VIT_14s0081g00360.t01	Wine grape	cytosol	11.93	20.48
VIT_14s0081g00390.t01	Wine grape	cytosol	14.29	20.08
VIT_05s0020g04750.t01	Wine grape	cytosol, peroxisome, plasma membrane	13.87	19.46
VIT_12s0059g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	15.53	19.24
VIT_05s0124g00670.t01	Wine grape	cytosol	14.7	18.31
VIT_05s0165g00270.t01	Wine grape	cytosol, mitochondrion, plasma membrane	13.04	17.97
VIT_19s0014g05330.t01	Wine grape	extracellular	14.42	17.96
VIT_14s0081g00420.t01	Wine grape	cytosol	14.7	17.82
VIT_12s0059g00060.t01	Wine grape	cytosol	12.34	17.32
VIT_13s0047g01220.t01	Wine grape	plasma membrane	14.84	17.26
VIT_12s0028g03950.t01	Wine grape	cytosol, extracellular, plasma membrane	15.95	17.24
VIT_05s0029g01420.t01	Wine grape	cytosol	15.67	17.23
VIT_12s0028g04030.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	16.09	17.13
VIT_12s0059g00050.t01	Wine grape	plasma membrane	15.26	17.0
VIT_12s0028g03920.t01	Wine grape	cytosol, peroxisome, plasma membrane	15.67	16.97
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	16.37	16.88
VIT_05s0165g00010.t01	Wine grape	nucleus	10.54	16.49
VIT_05s0102g00030.t01	Wine grape	cytosol	13.45	16.44
VIT_05s0165g00140.t01	Wine grape	cytosol	10.54	16.31
VIT_05s0165g00290.t01	Wine grape	cytosol	13.59	16.31
VIT_12s0028g03990.t01	Wine grape	cytosol	13.31	16.19
VIT_05s0102g00050.t01	Wine grape	nucleus	13.45	16.14
VIT_05s0124g00720.t01	Wine grape	cytosol	8.46	16.05
VIT_05s0029g01540.t01	Wine grape	plasma membrane	14.7	15.89
VIT_05s0102g00060.t01	Wine grape	cytosol, nucleus, plasma membrane	12.9	15.84
VIT_05s0165g00160.t01	Wine grape	cytosol, peroxisome, plasma membrane	13.73	15.64
VIT_05s0165g00060.t01	Wine grape	cytosol	5.27	14.96
VIT_05s0029g01490.t01	Wine grape	cytosol	9.57	14.5
VIT_05s0029g01430.t01	Wine grape	cytosol, nucleus, plasma membrane	14.84	13.93
VIT_12s0028g04000.t01	Wine grape	cytosol, plasma membrane	15.26	13.37
VIT_12s0059g00080.t01	Wine grape	cytosol, nucleus, plasma membrane	15.67	12.75
CDY20642	Canola	nucleus	24.83	12.54
VIT_12s0028g04010.t01	Wine grape	cytosol	7.77	12.5
VIT_14s0081g00370.t01	Wine grape	cytosol	5.69	12.02
VIT_05s0124g00460.t01	Wine grape	cytosol	4.16	11.11
VIT_12s0059g00120.t01	Wine grape	cytosol	11.37	9.94

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100258390	wikigene:100258390	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ProteinID:CCB59446	ProteinID:CCB59446.1	ncoils:Coil	UniProt:F6HYC3	EMBL:FN596494
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EntrezGene:LOC100258390	wikigene:LOC100258390	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403
TMHMM:TMhelix	UniParc:UPI000210A4D2	ArrayExpress:VIT_09s0002g03910	EnsemblPlantsGene:VIT_09s0002g03910	EnsemblPlants:VIT_09s0002g03910.t01	RefSeq:XP_002278844
RefSeq:XP_002278844.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:-:3626482..3629039

Molecular Weight (calculated)

80857.2 Da

IEP (calculated)

7.607

GRAVY (calculated)

-0.231

Length

721 amino acids

Sequence
(BLAST)

001: MRTSLFKAIA TNDKPAFIQL INEGYAFETT AKSKSTVLHL ASRFGHGELV LEIIRLHPRM VEARNKKGET PLHEACRNGN AKVVMLLLDA NPWLGCALNN
101: EDQSPLFLAC HNGHPHVVEL ILKQPWMVEF EEDNPDMNCL HVAVSRGHTC SYIADVARRI LEVCPNFAPK TDDMGLSALH YACSGDNLEI TKMLLGLDPG
201: LAVKFDNNGY TPLHLAAMNA KDAILEEFLA MVPASFQLLT REGETVFHLA VRFNRFNAFV WLAQNFGDTD LFHQPDKSGN TILHLAASAG RHRLADYIIN
301: KTRVEINFRN SGGHTVLDIL DQAGSSSKNK HLKDMIIEKA NGKRSIELSS LMPVPVIERT SPQPLAHEER PEDVRDEELK IPLESGTHSQ SRFELSTDDK
401: LDNHTTGHLP ALYIEMNSGV DFLNHQVEEK SEIQDDNQSE LRPALSNRTR YSSSCLCRHK HLSQRHRRDL LELHKVRQNR QNEIYKEALQ NARNTIILVA
501: VLIATVTFTA GISPPGGVYQ EGPMKGKSTV GRTTSFKVFM ISNNIALFSS LCIVIVLVSI IPFQRKPLVR LLVVAHKIMW VAVSSMATAY VAATWVIIPH
601: DRGTTWTLEV VFCFSVGTVG TIFVYLGLVL VRHWLMKLKT RREKHTKSKG KKEIEEAEAA ADKFEVITSS GHWREKHTKW KAMKEIEEAG AAADDKSEDV
701: TLSSYSDVDS ARRLGLGYHV Y

Best Arabidopsis Sequence Match ( AT1G10340.2 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSIVGTILER FPDLAREEAW VVEDGSQSTL LHHACDKGDF ELTTILLGLD QGLEEALNPN
201: GLSPLHLAVL RGSVVILEEF LDKVPLSFSS ITPSKETVFH LAARNKNMDA FVFMAESLGI NSQILLQQTD ESGNTVLHIA ASVSFDAPLI RYIVGKNIVD
301: ITSKNKMGFE AFQLLPREAQ DFELLSRWLR FGTETSQELD SENNVEQHEG SQEVEVIRLL RIIGINTSEI AERKRSKEQE VERGRQNLEY QMHIEALQNA
401: RNTIAIVAVL IASVAYAGGI NPPGGVYQDG PWRGKSLVGK TTAFKVFAIC NNIALFTSLG IVILLVSIIP YKRKPLKRLL VATHRMMWVS VGFMATAYIA
501: ASWVTIPHYH GTQWLFPAIV AVAGGALTVL FFYLGVETIG HWFKKMNRVG DNIPSFARTS SDLAVSGKSG YFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.