Factsheet for Bra029009.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G50140.1	Thale cress	plasma membrane	53.17	43.93
Bra018445.1-P	Field mustard	cytosol	45.7	33.89
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.98	33.76
AT5G54710.2	Thale cress	cytosol	48.87	33.59
Bra018444.1-P	Field mustard	cytosol	45.02	33.56
VIT_09s0002g03920.t01	Wine grape	cytosol	37.78	29.2
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	37.78	25.81
VIT_09s0002g03910.t01	Wine grape	plasma membrane	38.46	23.58
Bra009576.1-P	Field mustard	cytosol	22.4	18.79
Bra018683.1-P	Field mustard	cytosol	22.85	18.74
Bra006680.1-P	Field mustard	plastid	21.27	17.22
Bra030618.1-P	Field mustard	cytosol	21.95	15.85
Bra021752.1-P	Field mustard	cytosol	22.62	15.36
Bra001304.1-P	Field mustard	nucleus	21.04	15.27
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	21.27	15.23
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.68	15.1
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.59	14.87
Bra000823.1-P	Field mustard	plasma membrane	14.71	14.64
Bra038714.1-P	Field mustard	cytosol, plastid	19.0	14.56
Bra034760.1-P	Field mustard	cytosol	18.78	14.19
Bra024863.1-P	Field mustard	cytosol	16.97	14.07
Bra034209.1-P	Field mustard	cytosol	19.46	13.78
Bra023774.1-P	Field mustard	plasma membrane	19.0	13.77
Bra033416.1-P	Field mustard	cytosol	16.29	12.83
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.1	11.16
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.52	10.35

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra029009
EnsemblPlants:Bra029009.1	EnsemblPlants:Bra029009.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4EJP3
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000253FEEA	SEG:seg

Description

AT5G54710 (E=8e-078) | ankyrin repeat family protein

Coordinates

chrA03:+:5848905..5850719

Molecular Weight (calculated)

48783.3 Da

IEP (calculated)

7.288

GRAVY (calculated)

0.091

Length

442 amino acids

Sequence
(BLAST)

001: MAPQKFIRND MISLPRLVEE YLSMLKETYE GTGLHLATQQ GDEVYAKKII ELCPSLVGST NSKGDTPLHV AARLGYTSIF IGMLESLKLH NACERKTIDA
101: EMMNNDGLTP LHCAAMKGSV EILEEFLNRA PSSFYSVTLE KRETVFHIAA RHKQNEAFIS MAKSDNLGQL LYQLDVDGNT VLHVAASVGS IALVNYIMVE
201: TNVKVTTKNK NGFVAVDLLN EEDKDFLKLS NALMCGQRSS SPREIGNQTK AVILHRADDD TIKKRQKEIL RFQSSDTPNK KFEMQLEALQ SARNTLAIVA
301: VLIASVTFTC GLNPPGGVYQ EGSYIGKSTA GKTIAFMIFW ISNSIALFTS VSMVILLVSI IPYREDSLLK FLVIAHWMMW VAVAAMASAY VSAALVTLPH
401: FGETNWLIIY ATVAIASLTL GVRKNGYADM AANIEKGYYS YC

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.