Factsheet for Bra030618.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15549	Canola	cytosol	91.01	99.82
CDX86566	Canola	cytosol	87.58	92.89
AT1G05640.1	Thale cress	cytosol	88.24	86.12
Bra021752.1-P	Field mustard	cytosol	83.82	78.8
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	78.76	78.12
KRG97307	Soybean	cytosol	66.18	72.58
KRH69034	Soybean	cytosol	66.67	72.08
KRH27553	Soybean	cytosol, peroxisome, plasma membrane	29.58	71.26
VIT_05s0094g01320.t01	Wine grape	cytosol	66.5	69.69
Solyc12g019060.1.1	Tomato	cytosol	62.42	67.02
PGSC0003DMT400064924	Potato	cytosol	59.64	66.24
PGSC0003DMT400052568	Potato	cytosol	61.76	66.2
Solyc12g096670.1.1	Tomato	cytosol	61.6	65.68
Solyc08g014570.2.1	Tomato	cytosol, peroxisome, plasma membrane	60.13	65.48
PGSC0003DMT400075256	Potato	cytosol	59.8	65.01
GSMUA_Achr7P23720_001	Banana	cytosol, peroxisome, plasma membrane	24.84	64.96
KRH64845	Soybean	cytosol	56.86	62.93
TraesCS7D01G268900.1	Wheat	cytosol	53.76	59.82
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	56.37	59.79
TraesCS7B01G166600.1	Wheat	cytosol	53.43	59.45
HORVU7Hr1G056430.1	Barley	cytosol	53.43	59.35
TraesCS7A01G265800.1	Wheat	cytosol	53.1	59.09
Zm00001d006142_P002	Maize	cytosol	53.43	58.19
Zm00001d006147_P002	Maize	cytosol	53.43	58.19
EER97054	Sorghum	cytosol	53.43	58.19
EES15259	Sorghum	cytosol	53.43	58.19
Os08t0542700-01	Rice	cytosol	52.78	57.99
Zm00001d021169_P002	Maize	cytosol	53.92	57.59
Zm00001d031706_P001	Maize	cytosol	52.78	57.58
Os09t0518500-01	Rice	cytosol	52.61	57.3
TraesCS5B01G305700.1	Wheat	cytosol	52.61	56.99
TraesCS5D01G312200.1	Wheat	cytosol	52.45	56.81
HORVU5Hr1G079730.3	Barley	cytosol	52.29	56.64
TraesCS5A01G305200.1	Wheat	cytosol	51.96	56.28
Bra018683.1-P	Field mustard	cytosol	49.51	56.22
Bra006680.1-P	Field mustard	plastid	48.2	54.03
GSMUA_Achr7P23730_001	Banana	cytosol	27.94	53.94
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plasma membrane, plastid	57.19	53.85
Bra009576.1-P	Field mustard	cytosol	43.79	50.85
Bra024863.1-P	Field mustard	cytosol	35.78	41.09
Bra038714.1-P	Field mustard	cytosol, plastid	37.25	39.51
Bra034760.1-P	Field mustard	cytosol	37.75	39.49
Bra001304.1-P	Field mustard	nucleus	37.75	37.93
Bra029009.1-P	Field mustard	cytosol	15.85	21.95
Bra018445.1-P	Field mustard	cytosol	20.42	20.97
Bra018444.1-P	Field mustard	cytosol	19.44	20.07
Bra000823.1-P	Field mustard	plasma membrane	14.22	19.59
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.3	19.44
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.8	19.11
Bra023774.1-P	Field mustard	plasma membrane	18.3	18.36
Bra033416.1-P	Field mustard	cytosol	16.67	18.18
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.97	17.97
Bra034209.1-P	Field mustard	cytosol	17.65	17.31
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.99	14.5
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.5	14.33

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra030618
EnsemblPlants:Bra030618.1	EnsemblPlants:Bra030618.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4EP98	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24186	PANTHER:PTHR24186:SF8	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI00025454E8
SEG:seg	:	:	:	:	:

Description

AT1G05640 (E=2e-278) | ankyrin repeat family protein

Coordinates

chrA08:+:21057463..21059747

Molecular Weight (calculated)

67190.3 Da

IEP (calculated)

10.181

GRAVY (calculated)

-0.108

Length

612 amino acids

Sequence
(BLAST)

001: MGSLPPVMEN QHSFLGNSIE VQESLRCVGA ENHPRKGRPL EKQVSFQHGT EGRAMERQRS LRGFVEKQKS FRVVIERQLS FMNGEKKMKK NESPGKRGDS
101: PLHIAARTGN LGKVLESIRS CNGAEELKEL LSKQNLEGET PLYTAADNGH SLVVEEMLKH MNLETASIAA RNGFDPFHVA AKQGHLETLK KLLETFPNLA
201: MTTDLLCTTA LHTAATQGHI DVVNLLLKTD SHLAKIAKNN GKTALHSAAR MGHVEVVKSL IGNDASIGFR TDKKGQTALH MAVKGKQEGI VLELVRPDPK
301: VLSVEDNKGN TPLHIATKKG RTKIVRCLVS FDGINLNALN KAGDTALDIA EKIGNAELVL VLKEAGAATA KDLGKPQNPA KQLKQTVSDI RHEVQSQLQQ
401: SRQTGARVQR IAKRLKKLHI NGLNNAINSA TVVAVLIATV AFAAIFTIPG QYEEDRTRGP LVLGEARIAN EAPFLVFFIF DSLALFISLA VVVVQTSVVV
501: IEQKAKKKLV FVINKLMWLA CLFISIAFVS LSFIVVGKED MWLAICATVI GGTIMLTTIG AMCYCVVMHR IEECKLKQMR KERSKSRSFS LSHMPSESEI
601: LNGELNKRMY AL

Best Arabidopsis Sequence Match ( AT1G05640.1 )
(BLAST)

001: MSSLVPVMEK QESVRGNSVE EQQSLRCVGA ENQVRKGRAL DKQVSFLAVN VVEKHGIKGR AMEKQERAME RQRSFRGFVE KQKSFRVVME RQLSFMNVGG
101: ERKKKTDSPG KRGDSPLHLA ARTGNLGKVM ELIRACNGIE ELKELSSKQN LEGETPLYSA AENGHSLVVE EMLKHMDLDT ASVKARNGFD PFHVAAKQGH
201: IEALKKLLET FPNLAMTVDL SCTTALHTAA SQGHTDVVNL LLKTDSHLAK IAKNNGKTAL HSAARMGHRE VVKSLIGNDA SIGFRTDKKG QTALHMAVKG
301: QNEGIVLELV KPDPAILSVE DSKGNTPLHT ATNKGRIKIV RCLVSFDGIN LNAMNKAGDT ALDIAEKIGN PELVSVLKEA GAATAKDLGK PRNPAKQLNQ
401: TVSDIKHEVQ SQLQQSRQTG VRVRRIAKRL KKLHINGLNN AINSATVVAV LIATVAFAAI FTIPGQYEED RTKGLLLLGE ARIAGKAPFL VFFIFDSLAL
501: FISLAVVVVQ TSVVVIEQKA KKNLVFVINK LMWLACLFIS VAFVSLSFIV VGKEDIWLAI CATIIGGTIM LTTIGAMCYC VVMHRIEESK LKSLRKERSK
601: SKSFSLSHMP SESEILNGEF NKRMYAL

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.