Factsheet for Bra018445.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G10340.1	Thale cress	cytosol	76.01	78.37
Bra018444.1-P	Field mustard	cytosol	73.66	74.03
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.21	61.15
Bra029009.1-P	Field mustard	cytosol	33.89	45.7
VIT_09s0002g03920.t01	Wine grape	cytosol	35.4	36.89
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	36.91	34.0
VIT_09s0002g03910.t01	Wine grape	plasma membrane	37.92	31.35
CDY20642	Canola	nucleus	65.44	27.33
Bra018683.1-P	Field mustard	cytosol	20.13	22.26
Bra009576.1-P	Field mustard	cytosol	18.79	21.25
Bra006680.1-P	Field mustard	plastid	19.13	20.88
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	21.31	20.58
Bra030618.1-P	Field mustard	cytosol	20.97	20.42
Bra038714.1-P	Field mustard	cytosol, plastid	19.63	20.28
Bra021752.1-P	Field mustard	cytosol	21.81	19.97
Bra034760.1-P	Field mustard	cytosol	19.46	19.83
Bra001304.1-P	Field mustard	nucleus	20.13	19.7
Bra024863.1-P	Field mustard	cytosol	16.28	18.2
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.28	16.84
Bra023774.1-P	Field mustard	plasma membrane	16.61	16.23
Bra000823.1-P	Field mustard	plasma membrane	11.74	15.77
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.44	15.03
Bra034209.1-P	Field mustard	cytosol	15.27	14.58
Bra033416.1-P	Field mustard	cytosol	13.09	13.9
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.1	12.55
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.26	12.06

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra018445
EnsemblPlants:Bra018445.1	EnsemblPlants:Bra018445.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DPK4
PFAM:PF12796	PFAM:PF13637	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF140860	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI0002547F46	SEG:seg	:	:	:	:

Description

AT1G10340 (E=7e-147) | ankyrin repeat family protein

Coordinates

chrA05:+:8254031..8256374

Molecular Weight (calculated)

65300.1 Da

IEP (calculated)

7.074

GRAVY (calculated)

0.085

Length

596 amino acids

Sequence
(BLAST)

001: MQPIFHAILQ NDLPTFLSLV EERNSSLEER TDKEHLNDTV LHMAAKLGHG ELVSKIIDRR PSLVCSVNAE GNTPLHLAAL LGDVDMVMQM LETGLEACTA
101: RNNNNDTPLH LACRSISMEA AKLVAEKTNS VDLGELNFAI SSGSTGVAKI ILERFPDLAR EEAWSVEGGS LSTLLHHACD RGDLELTRIL LGLDQSLETA
201: LNTKGLLPLH LAVLRGSVVI LEEFINKAPL SFLSHTPSKE TVFHLAARSK NMDAFVYMAE RLGSNGQFLL QQTDENGNTV LHTAASVACG APLIRYIIGM
301: KIVDISNKNK MGFAAYHLLP HDAQDFELLS SWLRFDTETS DELDPDVVEV YLDASSPVKP LRSRFESSVA RKNSHEDEVI KLLNLIGLNT SEMVERKTRK
401: AHGVKKGSEN LEYDMYIEAL QNARNTITIV AVLIASVAYA GGINPPGGVY QDGPWRGKSI VGKTTAFKVF AICNNIALFT SLAIVILLVS IIPYKRKPLK
501: KLLVATHRMM WVSIGFMATA YVAASWVTIP HYHGTRWLFP AIVAVAGGAL AVLFSYLGVE AIGHWFKKKA RVGVIPSFAR NNSDLAISGK SGYFAF

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.