Factsheet for Bra024863.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17652	Canola	cytosol	99.44	99.44
AT2G01680.1	Thale cress	cytosol, plasma membrane	92.5	92.67
KRH60413	Soybean	cytosol	72.42	72.83
VIT_01s0011g05700.t01	Wine grape	cytosol	71.86	71.99
KRH41712	Soybean	cytosol	70.92	71.59
PGSC0003DMT400051426	Potato	plasma membrane	69.79	71.13
Solyc01g005340.2.1	Tomato	plasma membrane	69.79	71.13
Zm00001d051244_P001	Maize	cytosol	15.95	69.11
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	66.6	67.62
KRH49636	Soybean	cytosol	66.42	67.43
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	62.29	63.97
Os02t0735700-01	Rice	plasma membrane	59.66	60.46
Zm00001d017959_P001	Maize	plasma membrane	59.1	59.89
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	58.72	59.62
TraesCS6B01G327600.1	Wheat	cytosol	58.72	59.62
EES07299	Sorghum	cytosol, plasma membrane	58.72	59.17
Zm00001d051806_P001	Maize	cytosol, plasma membrane	58.35	59.13
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.08	54.81
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.08	54.81
Zm00001d033803_P001	Maize	plasma membrane, vacuole	31.89	54.49
Bra018683.1-P	Field mustard	cytosol	41.65	41.19
Bra009576.1-P	Field mustard	cytosol	37.9	38.33
Bra006680.1-P	Field mustard	plastid	39.21	38.28
Zm00001d030264_P001	Maize	plastid	18.76	37.59
Bra038714.1-P	Field mustard	cytosol, plastid	39.21	36.22
Bra034760.1-P	Field mustard	cytosol	39.59	36.07
Bra030618.1-P	Field mustard	cytosol	41.09	35.78
Bra021752.1-P	Field mustard	cytosol	41.46	33.95
Bra001304.1-P	Field mustard	nucleus	38.65	33.83
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	37.52	32.41
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.13	17.2
Bra029009.1-P	Field mustard	cytosol	14.07	16.97
Bra018444.1-P	Field mustard	cytosol	18.57	16.69
Bra000823.1-P	Field mustard	plasma membrane	13.7	16.44
Bra018445.1-P	Field mustard	cytosol	18.2	16.28
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.45	16.15
Bra023774.1-P	Field mustard	plasma membrane	17.07	14.92
Bra033416.1-P	Field mustard	cytosol	15.57	14.79
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	16.7	14.54
Bra034209.1-P	Field mustard	cytosol	15.95	13.62
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.57	11.77
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.57	11.58

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
EnsemblPlantsGene:Bra024863	EnsemblPlants:Bra024863.1	EnsemblPlants:Bra024863.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4E7V7	PFAM:PF00023	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000253F947	SEG:seg	:

Description

AT2G01680 (E=1e-268) | ankyrin repeat family protein

Coordinates

chrA06:-:23936043..23938396

Molecular Weight (calculated)

58587.6 Da

IEP (calculated)

8.157

GRAVY (calculated)

0.031

Length

533 amino acids

Sequence
(BLAST)

001: MEAKQMRFLT HQAFFSSVRS GDLNQLQELV EKLTGDELID ESSPSSAVSE LMSVQNDAGE TAVYIAAAEN LQDVFSYLIT FCSLEAVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLDLWPEL CKICDASNTS PIYAAAVQDH LEIVNAMLDA DPSCAMIVRK NGKTSLHTAG RYGLLRIVRA LIERDAAIVG VKDKKGQTAL
201: HMAVKGQSVE VVEEILQADY SILNDRDRKG NTALHIATRK CRPQITSLLL TFTAIEVNAV NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTDG SRAGKAEISG STGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITVTVL GMPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSGSRSF SWSYSAHVSD FEDESDFEKI IAL

Best Arabidopsis Sequence Match ( AT2G01680.1 )
(BLAST)

001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL

Arabidopsis Description

Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.