Factsheet for Bra018683.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
nucleus 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93618	Canola	cytosol	53.43	100.0
CDX95126	Canola	cytosol	98.14	97.96
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	94.43	93.74
CDY55069	Canola	cytosol, peroxisome, plasma membrane	38.96	87.5
PGSC0003DMT400078144	Potato	cytosol	71.43	71.96
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	70.87	71.4
GSMUA_Achr8P02120_001	Banana	cytosol	68.27	68.4
Bra006680.1-P	Field mustard	plastid	69.2	68.31
Solyc11g072960.1.1	Tomato	cytosol	65.49	66.48
TraesCS4B01G202300.1	Wheat	cytosol	66.23	66.11
CDX99605	Canola	cytosol	34.88	65.96
PGSC0003DMT400040191	Potato	cytosol	65.49	65.86
TraesCS4D01G203200.1	Wheat	cytosol	65.86	65.74
CDY59983	Canola	cytosol	36.73	65.56
CDX73200	Canola	cytosol	36.73	65.56
PGSC0003DMT400025094	Potato	cytosol	64.56	64.44
TraesCS4A01G102300.1	Wheat	cytosol	65.12	64.29
Os03t0281100-00	Rice	cytosol	64.56	61.59
Solyc06g005240.2.1	Tomato	cytosol	51.21	61.33
GSMUA_Achr6P33230_001	Banana	cytosol	67.16	61.05
Zm00001d028680_P001	Maize	cytosol	62.71	60.14
Bra009576.1-P	Field mustard	cytosol	57.33	58.63
EER95066	Sorghum	cytosol	61.41	58.38
GSMUA_Achr9P04150_001	Banana	plasma membrane	65.86	53.95
HORVU4Hr1G058450.9	Barley	plastid	57.14	50.08
Bra030618.1-P	Field mustard	cytosol	56.22	49.51
Bra021752.1-P	Field mustard	cytosol	56.22	46.54
Bra005639.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	53.25	46.52
Bra024863.1-P	Field mustard	cytosol	41.19	41.65
Bra038714.1-P	Field mustard	cytosol, plastid	44.16	41.25
Bra034760.1-P	Field mustard	cytosol	44.16	40.68
Bra001304.1-P	Field mustard	nucleus	43.6	38.59
Bra029009.1-P	Field mustard	cytosol	18.74	22.85
Bra018444.1-P	Field mustard	cytosol	22.82	20.74
Bra000823.1-P	Field mustard	plasma membrane	16.7	20.27
Bra018445.1-P	Field mustard	cytosol	22.26	20.13
Bra032143.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.32	19.43
Bra001112.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.41	19.1
Bra034209.1-P	Field mustard	cytosol	20.59	17.79
Bra023774.1-P	Field mustard	plasma membrane	20.04	17.7
Bra020727.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.67	17.32
Bra033416.1-P	Field mustard	cytosol	16.7	16.04
Bra034211.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.48	14.64
Bra034210.1-P	Field mustard	cytosol, nucleus, plasma membrane	17.81	13.62

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620
EnsemblPlantsGene:Bra018683	EnsemblPlants:Bra018683.1	EnsemblPlants:Bra018683.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
UniProt:M4DQ90	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24186	PANTHER:PTHR24186:SF10	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000253EDE3
SEG:seg	:	:	:	:	:

Description

AT1G07710 (E=9e-250) | ankyrin repeat family protein

Coordinates

chrA06:+:2628753..2630460

Molecular Weight (calculated)

58650.2 Da

IEP (calculated)

9.204

GRAVY (calculated)

-0.022

Length

539 amino acids

Sequence
(BLAST)

001: MEGEEDTVPK KKMAKQLTGK REDTLLHSAV RRGNKDEVVE ILTKTREPQL NELLGKQNQS GETALYVAAE YGDVEIVKEM IKRYDLSLVE IKARNGFDAF
101: HIAAKQGDLD VLKVLAEAHS ELAMTVDLLN TTALHTAATQ GHTDVVNFLL ELGSSLAGIA KSNGKTALHS ASRNGHVKVV KALLASEPAI AIRMDKKGQT
201: ALHMAAKGTN VEVVEELIKA DRSSINIADT KGNTALHIAA RKGRSQIVKL LLDNNITDTK AVNRTGETAL DTAEKVGNPE VALILQKHGV PSAKTIKPSG
301: ANPARELKQT VSDIKHEVHN QLEHTRQTRR RVQGIAKQLN KMHTEGLNNA INSTTVVAVL IATVAFAAIF TVPGQYVEDI TNLPDGHSLG EANIASTTPF
401: IIFFIFDSIA LFISLAVVVV QTSVVVIESK AKKQMMAVIN KLMWLACVLI SVAFLALSFV VVGEEEKWLA IWVTAIGATI MITTLGTMCY WIIQHKIEAA
501: NARNIRRSSI NNSKSGSWGI PQLTDTDVLQ NECKKMYAI

Best Arabidopsis Sequence Match ( AT1G07710.2 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.