CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59983	Canola	cytosol	96.49	91.06
CDX73200	Canola	cytosol	96.49	91.06
CDY55069	Canola	cytosol, peroxisome, plasma membrane	64.91	77.08
CDX93618	Canola	cytosol	62.11	61.46
CDX95126	Canola	cytosol	66.67	35.19
Bra018683.1-P	Field mustard	cytosol	65.96	34.88
AT1G07710.1	Thale cress	cytosol, peroxisome, plasma membrane	64.91	34.07
PGSC0003DMT400078144	Potato	cytosol	52.63	28.04
Solyc06g075600.2.1	Tomato	cytosol, peroxisome, plasma membrane	51.93	27.66
CDX71059	Canola	plastid	51.58	26.92
TraesCS4B01G202300.1	Wheat	cytosol	50.18	26.48
Solyc11g072960.1.1	Tomato	cytosol	49.12	26.37
CDX88738	Canola	plastid	49.47	26.31
TraesCS4D01G203200.1	Wheat	cytosol	49.82	26.3
GSMUA_Achr8P02120_001	Banana	cytosol	49.12	26.02
TraesCS4A01G102300.1	Wheat	cytosol	49.82	26.01
PGSC0003DMT400040191	Potato	cytosol	48.77	25.93
Solyc06g005240.2.1	Tomato	cytosol	39.65	25.11
CDY10435	Canola	cytosol	45.61	24.67
Os03t0281100-00	Rice	cytosol	48.77	24.6
CDY70132	Canola	cytosol	45.26	24.48
PGSC0003DMT400025094	Potato	cytosol	46.32	24.44
GSMUA_Achr6P33230_001	Banana	cytosol	50.18	24.11
Zm00001d028680_P001	Maize	cytosol	46.67	23.67
EER95066	Sorghum	cytosol	46.32	23.28
HORVU4Hr1G058450.9	Barley	plastid	49.47	22.93
CDY58363	Canola	cytosol	43.51	22.3
CDY15549	Canola	cytosol	43.16	22.04
GSMUA_Achr9P04150_001	Banana	plasma membrane	49.47	21.43
CDX86566	Canola	cytosol	43.16	21.32
CDY19113	Canola	cytosol	43.86	19.81
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	42.46	19.45
CDY17652	Canola	cytosol	35.09	18.76
CDY36249	Canola	cytosol	35.09	18.69
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	39.3	17.86
CDY42145	Canola	cytosol	34.39	16.75
CDY50551	Canola	cytosol	34.04	16.47
CDY50335	Canola	cytosol	34.04	16.47
CDY07932	Canola	nucleus, plastid	34.39	16.36
CDX73985	Canola	nucleus	34.39	16.09
CDY08436	Canola	cytosol	34.04	14.7
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	7.37	13.55
CDY20639	Canola	cytosol, peroxisome, plasma membrane	16.14	10.04
CDY20943	Canola	cytosol	19.65	9.74
CDY39673	Canola	plasma membrane	19.3	9.17
CDY20635	Canola	plasma membrane	18.25	8.92
CDY48208	Canola	cytosol	19.3	8.83
CDY69308	Canola	plasma membrane	18.25	8.77
CDX74181	Canola	cytosol, peroxisome, plasma membrane	17.19	8.48
CDY40662	Canola	plasma membrane	16.84	8.32
CDY16445	Canola	cytosol, plasma membrane, plastid	16.49	8.32
CDY30009	Canola	cytosol, plasma membrane, plastid	17.19	8.31
CDY35767	Canola	cytosol, peroxisome, plasma membrane	17.54	8.17
CDY40658	Canola	cytosol, peroxisome, plasma membrane	16.49	8.15
CDY18182	Canola	cytosol, peroxisome, plasma membrane	14.04	7.09
CDY42176	Canola	cytosol, peroxisome, plasma membrane	15.79	6.96
CDY58683	Canola	cytosol	7.37	6.89
CDY48209	Canola	cytosol, peroxisome, plasma membrane	15.44	6.23
CDY21967	Canola	plasma membrane	16.14	6.09
CDY45914	Canola	cytosol	8.07	5.24
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	11.93	4.8
CDY20642	Canola	nucleus	20.0	3.99
CDY58682	Canola	cytosol	0.0	0.0
CDY16446	Canola	cytosol	0.0	0.0
CDY21969	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078EC11	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:At2g01680/At5g02620	EnsemblPlants:CDX99605	ProteinID:CDX99605	ProteinID:CDX99605.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00108107001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EF2CFD	SEG:seg	:

Description

BnaC04g33620D

Coordinates

chrLK031912:-:284470..286076

Molecular Weight (calculated)

31032.4 Da

IEP (calculated)

9.690

GRAVY (calculated)

-0.102

Length

285 amino acids

Sequence
(BLAST)

001: MDKKGQTALH MAAKGTNVEV VEELIKADRS SINIADTKGN TALHIAARKG RSHIVKLLLD NNITDTKATR RRVQGIAKQL NKMHTEGLNN AINSTTVVAV
101: LIATLAFAAI FTVPGQYVED TSNLPDGHSL REANIASTTP FIIFFIFDSI ALFISLAVVV VQTSVVVIES KAKKQMMADL NLSKMVLMLK KIITSPYMLN
201: EFDVSSYPKG GSNTFYPDFS HRFEEQEGCV LVTESSSVDS TSNVKAPVKR EGSPIEKIEP AFYQSSANNH GPSVTIKKAK TEKSG

Best Arabidopsis Sequence Match ( AT1G07710.1 )
(BLAST)

001: MEGEEDTVAG SSIPKKKMMK QLTGKRDDTL LHSAVRHGNK DRVVEILTKT RESELNQLLG KQNQSGETAL YVAAEYGDVE IVKEMINCYD LALVEIKARN
101: GFDAFHIAAK QGDLDVLKVL AEAHSELAMT VDLSNTTALH TAATQGHTEV VNFLLELGSS LAGIAKSNGK TALHSASRNG HVKVIKALLA SEPAIAIRMD
201: KKGQTALHMA VKGTNVEVVE ELIKADRSSI NIADTKGNTA LHIAARKGRS QIVKLLLANN MTDTKAVNRS GETALDTAEK IGNPEVALIL QKHGVPSAKT
301: IKPSGPNPAR ELKQTVSDIK HEVHNQLEHT RLTRKRVQGI AKQLNKMHTE GLNNAINSTT VVAVLIATVA FAAIFTVPGQ YVEDTSKIPD GHSLGEANIA
401: STTPFIIFFI FDSIALFISL AVVVVQTSVV VIESKAKKQM MAVINKLMWL ACVLISVAFL ALSFVVVGEE EKWLAIWVTA IGATIMITTL GTMCYWIIQH
501: KIEAANLRNI RRSSINSISG SWGIPQLTDS DILQNECKKM YAI

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LQP7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.