CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17652	Canola	cytosol	98.69	99.06
AT2G01680.1	Thale cress	cytosol, plasma membrane	92.34	92.86
KRH60413	Soybean	cytosol	71.78	72.45
KRH41712	Soybean	cytosol	70.28	71.21
VIT_01s0011g05700.t01	Wine grape	cytosol	70.65	71.05
PGSC0003DMT400051426	Potato	plasma membrane	68.97	70.55
Solyc01g005340.2.1	Tomato	plasma membrane	68.97	70.55
KRH70344	Soybean	cytosol, peroxisome, plasma membrane	66.36	67.62
Zm00001d051244_P001	Maize	cytosol	15.51	67.48
KRH49636	Soybean	cytosol	65.98	67.24
GSMUA_Achr5P05930_001	Banana	cytosol, plasma membrane	63.18	65.13
Os02t0735700-01	Rice	plasma membrane	59.25	60.27
Zm00001d017959_P001	Maize	plasma membrane	58.69	59.7
TraesCS6D01G277900.1	Wheat	cytosol, plasma membrane	58.32	59.43
TraesCS6B01G327600.1	Wheat	cytosol	58.32	59.43
EES07299	Sorghum	cytosol, plasma membrane	58.32	58.98
Zm00001d051806_P001	Maize	cytosol, plasma membrane	57.94	58.94
Zm00001d005701_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.96	54.81
Zm00001d025440_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	31.96	54.81
Zm00001d033803_P001	Maize	plasma membrane, vacuole	31.78	54.49
CDX93618	Canola	cytosol	25.23	46.88
CDY55069	Canola	cytosol, peroxisome, plasma membrane	20.93	46.67
CDX95126	Canola	cytosol	41.68	41.3
CDY58363	Canola	cytosol	41.12	39.57
CDY15549	Canola	cytosol	40.75	39.07
CDX88738	Canola	plastid	38.69	38.62
CDY10435	Canola	cytosol	37.94	38.52
CDY70132	Canola	cytosol	37.57	38.14
CDX71059	Canola	plastid	38.88	38.1
Zm00001d030264_P001	Maize	plastid	18.69	37.59
CDY42145	Canola	cytosol	39.44	36.07
CDY50551	Canola	cytosol	39.63	35.99
CDY50335	Canola	cytosol	39.44	35.82
CDX99605	Canola	cytosol	18.69	35.09
CDY19113	Canola	cytosol	41.31	35.02
CDX73200	Canola	cytosol	19.63	34.77
CDY59983	Canola	cytosol	19.63	34.77
CDY07932	Canola	nucleus, plastid	38.69	34.56
CDX86566	Canola	cytosol	37.2	34.49
CDX73985	Canola	nucleus	38.5	33.83
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	39.25	33.76
CDY08436	Canola	cytosol	39.63	32.12
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	37.38	31.9
CDY58683	Canola	cytosol	10.84	19.02
CDY39673	Canola	plasma membrane	19.44	17.33
CDY20943	Canola	cytosol	18.5	17.22
CDY18182	Canola	cytosol, peroxisome, plasma membrane	18.13	17.2
CDY69308	Canola	plasma membrane	18.88	17.03
CDY20639	Canola	cytosol, peroxisome, plasma membrane	14.58	17.03
CDY16445	Canola	cytosol, plasma membrane, plastid	17.94	16.99
CDY20635	Canola	plasma membrane	18.13	16.64
CDX74181	Canola	cytosol, peroxisome, plasma membrane	17.2	15.92
CDY40662	Canola	plasma membrane	16.82	15.6
CDY30009	Canola	cytosol, plasma membrane, plastid	17.2	15.59
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	4.49	15.48
CDY40658	Canola	cytosol, peroxisome, plasma membrane	16.64	15.42
CDY48208	Canola	cytosol	17.76	15.25
CDY35767	Canola	cytosol, peroxisome, plasma membrane	17.01	14.87
CDY42176	Canola	cytosol, peroxisome, plasma membrane	17.76	14.68
CDY45914	Canola	cytosol	11.4	13.9
CDY48209	Canola	cytosol, peroxisome, plasma membrane	16.26	12.32
CDY21967	Canola	plasma membrane	16.45	11.66
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	14.21	10.73
CDY21969	Canola	nucleus	4.86	7.76
CDY16446	Canola	cytosol	0.19	7.14
CDY20642	Canola	nucleus	15.89	5.96
CDY58682	Canola	cytosol	0.37	2.38

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078HFQ7	UniProt:A0A078HFQ7	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:At2g01680/At5g02620	EnsemblPlants:CDY36249	ProteinID:CDY36249	ProteinID:CDY36249.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00060206001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796
PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24186	PANTHER:PTHR24186:SF10
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EDAD8D	SEG:seg	:

Description

BnaC07g21030DBnaC07g21030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFQ7]

Coordinates

chrLK032371:+:238598..241562

Molecular Weight (calculated)

58914.0 Da

IEP (calculated)

8.617

GRAVY (calculated)

0.016

Length

535 amino acids

Sequence
(BLAST)

001: MEAKQMRFLT HQAFFSSVRS GDLNQLQELV EKLTGDELID ESSPSSAVSE LMSVQNDAGE TAVYIAAAEN LQDVFSYLIR FCSLEAVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLSLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPTCAMIVRK NGKTSLHTAG RYGLLRIVRA LLERDAAIVG VKDKKGQTAL
201: HMAVKGQSVE VVEEILQADY SILNDRDRKG NTALHIATRK CRPQITSLLL TFTAIEVNAV NNQKETAMDL ADKLQYSESA LEINESLVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTDG SRAGKAEISG STGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITVTVL GMPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGRGSGSR SFSWSYSAHV SDFEDESDFE KIIAL

Best Arabidopsis Sequence Match ( AT2G01680.1 )
(BLAST)

001: MEMKQMKFLT HQAFFSSVRS GDLSQLQQLV DNLTGDELID ESSPCSAVAE LMSVQNDAGE TAVYISAAEN LEDIFRYLIR FSSLETVKIR SKSDMNAFHV
101: AAKRGHLGIV KELLRLWPEL CRICDASNTS PLYAAAVQDH LEIVNAMLDV DPSCAMIVRK NGKTSLHTAG RYGLLRIVKA LIEKDAAIVG VKDKKGQTAL
201: HMAVKGRSLE VVEEILQADY TILNERDRKG NTALHIATRK ARPQITSLLL TFTAIEVNAI NNQKETAMDL ADKLQYSESA LEINEALVEA GAKHGRFIGR
301: EDEARALKRA VSDIKHEVQS QLLQNEKTNR RVSGIAKELR KLHREAVQNT TNSITVVAVL FASIAFLAIF NLPGQYFTEG SHVGQANIAG RTGFRVFCLL
401: NATSLFISLA VVVVQITLVA WDTRAQKKVV SVVNKLMWAA CACTFGAFLA IAFAVVGKGN SWMAITITLL GAPILVGTLA SMCYFVFRQR FRSGNDSQRR
501: IRRGSSKSFS WSYSHHVSDF EDESDFEKII AL

Arabidopsis Description

Ankyrin repeat-containing protein At2g01680 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU96]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.