Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 24.67 | 97.42 |
| Bra020727.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 96.73 | 96.73 |
| CDY45914 | Canola | cytosol | 65.03 | 90.66 |
| AT4G03500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 74.35 | 69.79 |
| CDY48208 | Canola | cytosol | 67.32 | 66.13 |
| VIT_12s0059g00130.t01 | Wine grape | cytosol | 27.45 | 44.09 |
| VIT_12s0059g00110.t01 | Wine grape | cytosol | 27.45 | 43.41 |
| VIT_12s0059g00150.t01 | Wine grape | cytosol | 26.96 | 42.64 |
| VIT_12s0028g04020.t01 | Wine grape | plasma membrane | 22.06 | 42.45 |
| VIT_12s0059g00090.t01 | Wine grape | cytosol | 24.02 | 40.95 |
| VIT_12s0028g03960.t01 | Wine grape | plasma membrane | 25.82 | 37.98 |
| VIT_12s0059g00160.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 36.11 | 37.97 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 34.31 | 37.23 |
| VIT_12s0028g03920.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 39.87 | 36.64 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 41.67 | 36.12 |
| VIT_12s0059g00050.t01 | Wine grape | plasma membrane | 36.6 | 34.62 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 39.38 | 34.04 |
| VIT_12s0059g00060.t01 | Wine grape | cytosol | 28.43 | 33.85 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 35.46 | 33.54 |
| VIT_12s0028g03990.t01 | Wine grape | cytosol | 32.19 | 33.22 |
| VIT_12s0028g04030.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 36.6 | 33.09 |
| CDY58683 | Canola | cytosol | 16.34 | 32.79 |
| VIT_12s0028g03950.t01 | Wine grape | cytosol, extracellular, plasma membrane | 34.31 | 31.48 |
| CDY21969 | Canola | nucleus | 16.5 | 30.15 |
| CDY21967 | Canola | plasma membrane | 36.27 | 29.4 |
| VIT_12s0028g04000.t01 | Wine grape | cytosol, plasma membrane | 36.6 | 27.22 |
| KRH25567 | Soybean | plasma membrane | 28.27 | 27.03 |
| VIT_12s0028g04010.t01 | Wine grape | cytosol | 19.77 | 27.01 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 24.35 | 26.37 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 9.97 | 25.42 |
| KRH25558 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 26.8 | 25.39 |
| KRH55987 | Soybean | cytosol, peroxisome, plasma membrane | 27.29 | 25.04 |
| KRH25555 | Soybean | cytosol, peroxisome, plasma membrane | 26.8 | 24.96 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 23.86 | 24.75 |
| VIT_12s0059g00080.t01 | Wine grape | cytosol, nucleus, plasma membrane | 35.78 | 24.72 |
| KRH55981 | Soybean | cytosol | 24.02 | 24.58 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 23.2 | 24.57 |
| CDY40662 | Canola | plasma membrane | 23.04 | 24.44 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 22.88 | 24.26 |
| CDX93618 | Canola | cytosol | 11.27 | 23.96 |
| KRH55978 | Soybean | cytosol, peroxisome, plasma membrane | 25.16 | 23.48 |
| KRH55984 | Soybean | cytosol | 23.37 | 21.54 |
| CDY10435 | Canola | cytosol | 18.3 | 21.25 |
| CDY70132 | Canola | cytosol | 18.14 | 21.06 |
| VIT_12s0059g00120.t01 | Wine grape | cytosol | 27.94 | 20.73 |
| CDX95126 | Canola | cytosol | 17.65 | 20.0 |
| CDX71059 | Canola | plastid | 17.48 | 19.6 |
| CDX88738 | Canola | plastid | 17.16 | 19.59 |
| CDY15549 | Canola | cytosol | 17.81 | 19.53 |
| KRH55986 | Soybean | cytosol | 8.17 | 19.46 |
| CDY58363 | Canola | cytosol | 17.65 | 19.42 |
| KRH55979 | Soybean | mitochondrion, nucleus | 6.7 | 18.64 |
| CDX73200 | Canola | cytosol | 9.15 | 18.54 |
| CDY59983 | Canola | cytosol | 8.82 | 17.88 |
| CDX86566 | Canola | cytosol | 16.83 | 17.85 |
| CDY42145 | Canola | cytosol | 16.83 | 17.61 |
| CDX99605 | Canola | cytosol | 8.17 | 17.54 |
| CDY50335 | Canola | cytosol | 16.83 | 17.49 |
| CDY50551 | Canola | cytosol | 16.67 | 17.32 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 12.91 | 17.25 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 17.32 | 17.04 |
| CDY36249 | Canola | cytosol | 14.87 | 17.01 |
| CDY19113 | Canola | cytosol | 17.48 | 16.96 |
| CDY17652 | Canola | cytosol | 14.71 | 16.89 |
| CDY20943 | Canola | cytosol | 15.85 | 16.87 |
| CDY07932 | Canola | nucleus, plastid | 16.5 | 16.86 |
| CDX73985 | Canola | nucleus | 16.5 | 16.58 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 16.5 | 16.11 |
| CDY20635 | Canola | plasma membrane | 15.2 | 15.95 |
| CDY69308 | Canola | plasma membrane | 15.36 | 15.85 |
| CDY08436 | Canola | cytosol | 16.83 | 15.61 |
| CDY39673 | Canola | plasma membrane | 15.03 | 15.33 |
| CDY58682 | Canola | cytosol | 1.14 | 8.33 |
| CDY16446 | Canola | cytosol | 0.16 | 7.14 |
| CDY20642 | Canola | nucleus | 12.75 | 5.47 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | GO:A0A078HD58 | UniProt:A0A078HD58 | InterPro:ACD6 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY35767 | ProteinID:CDY35767 | ProteinID:CDY35767.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031347 |
| GO:GO:0071446 | GO:GO:2000031 | EnsemblPlantsGene:GSBRNA2T00059217001 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| PFAM:PF00023 | PFAM:PF12796 | PFAM:PF13606 | PFAM:PF13962 | InterPro:PGG_dom | PFscan:PS50088 |
| PFscan:PS50297 | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF109 | SMART:SM00248 | SUPFAM:SSF48403 | TMHMM:TMhelix |
| UniParc:UPI0004EE4274 | SEG:seg | : | : | : | : |
Description
BnaC02g38270DBnaC02g38270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD58]
Coordinates
chrLK032360:-:57213..61408
Molecular Weight (calculated)
67327.4 Da
IEP (calculated)
8.878
GRAVY (calculated)
0.180
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPDVDFDG RVAQPSIPPI NNIISTPSLN GETISMDPKT MSAVRAGNVN YLRDNYSYVR LAPRLVTNHG NTMLHLAASS GHASLVRYLI NECPSLLMKS
101: NLMDEVVLHV AARTGHLDVT LHLVGFIKEI SRNAVGVAKR IYFAKNKNQD TALHVALKEK HMLVASYLVS AEKDLSFVAN SDGFSPLYLA IEAGQADLVA
201: AMCHQSSDLR SKVGGRSIVH AALKAKRKDI LTALLSKDAS LIDLRDEGRT CLSFGASIGY YKGICYLLDK YLDMVYLSDD DGLFPIHMAA KYGHVKILEE
301: ILKRCPEALE LIDKDGQNVL HVAARNGKLE PIKFILRIYK DKNKNKLINE QDVDGNTPLH LATKNWHPKV VSMLTWDNRV DLKKTNNKGF TALDVAEDNI
401: VSDYVFHQRL TWLALWSGGT PRSPTTNDRR IIMKLADGGR YKDQVNTLLL VATLVATMTF TAGLTLPGGY NGSAPNLGMA VLTKKTAFQV FLVCDTLAMY
501: CSIIIIVALL WAQLGDISII LKAFYMALPF LGLALTSMSI AFMAGTYAAV SHVPLLGCFV LGIGVIFLLV LLLFLVPYVA PIGNIHSFLG HLLYYPYFLR
601: LLAAGDNNNN ND
101: NLMDEVVLHV AARTGHLDVT LHLVGFIKEI SRNAVGVAKR IYFAKNKNQD TALHVALKEK HMLVASYLVS AEKDLSFVAN SDGFSPLYLA IEAGQADLVA
201: AMCHQSSDLR SKVGGRSIVH AALKAKRKDI LTALLSKDAS LIDLRDEGRT CLSFGASIGY YKGICYLLDK YLDMVYLSDD DGLFPIHMAA KYGHVKILEE
301: ILKRCPEALE LIDKDGQNVL HVAARNGKLE PIKFILRIYK DKNKNKLINE QDVDGNTPLH LATKNWHPKV VSMLTWDNRV DLKKTNNKGF TALDVAEDNI
401: VSDYVFHQRL TWLALWSGGT PRSPTTNDRR IIMKLADGGR YKDQVNTLLL VATLVATMTF TAGLTLPGGY NGSAPNLGMA VLTKKTAFQV FLVCDTLAMY
501: CSIIIIVALL WAQLGDISII LKAFYMALPF LGLALTSMSI AFMAGTYAAV SHVPLLGCFV LGIGVIFLLV LLLFLVPYVA PIGNIHSFLG HLLYYPYFLR
601: LLAAGDNNNN ND
001: MKNESRTSEE ISKLGIFSGV GFSMGRPDVH LDRRVAENHQ AIPRNNVRST PSLDLSTLFD ETSETKPMDP KTMAAVRAGK ENYLRSNNSY ISVAPTLVND
101: RGNTILHLAA SSGHVSLVRY IIQKCPGLLL KSNMMGEVAL HLAAEAGHLD VVWNLIDFIN DISCTNLPVA KRIYFAKNKN QDTALHVALK GKHEVVASYL
201: VSAAKSLSFV ANRDGFSPLY LAIEAGHTSL VTTMCHGTNE LSSKVGGRSI VHAALKANRK DILDALLSKD ASLINLRDEG RTSLSFGASI GYYQGFSYLF
301: DKNRDKVYVS DDDGLFPTHM AAKYGHVQIL EEILKHCPEA IELLDRDGQN ILHLAAKYGK LKVIKFILSC CKDKNKKKLI NEQDVNGNTP LHLATINWHP
401: KVVSMFTWDH RVDLKKRNYI GFTALDVAEE NIDSSYIVHQ RLTWMALINA GAPKSSTPIT ENLRSFKKPD GGKYKDRVNT LMLVATLVAT MTFTAGFTLP
501: GGYNDSFPHL GMAVLAKRTA FQVFLVCDTL AMYSSIITIV ALIWAQLGDL SIILKAFNIA LPFLGLALTS MSIAFMAGTY VAVSHLPLLG YFVLGIGIIF
601: LLVLLLLLVP YVSPYAHAQP LLRHIFYYPY FLKLLAAGDN KNIVDVYTAS DE
101: RGNTILHLAA SSGHVSLVRY IIQKCPGLLL KSNMMGEVAL HLAAEAGHLD VVWNLIDFIN DISCTNLPVA KRIYFAKNKN QDTALHVALK GKHEVVASYL
201: VSAAKSLSFV ANRDGFSPLY LAIEAGHTSL VTTMCHGTNE LSSKVGGRSI VHAALKANRK DILDALLSKD ASLINLRDEG RTSLSFGASI GYYQGFSYLF
301: DKNRDKVYVS DDDGLFPTHM AAKYGHVQIL EEILKHCPEA IELLDRDGQN ILHLAAKYGK LKVIKFILSC CKDKNKKKLI NEQDVNGNTP LHLATINWHP
401: KVVSMFTWDH RVDLKKRNYI GFTALDVAEE NIDSSYIVHQ RLTWMALINA GAPKSSTPIT ENLRSFKKPD GGKYKDRVNT LMLVATLVAT MTFTAGFTLP
501: GGYNDSFPHL GMAVLAKRTA FQVFLVCDTL AMYSSIITIV ALIWAQLGDL SIILKAFNIA LPFLGLALTS MSIAFMAGTY VAVSHLPLLG YFVLGIGIIF
601: LLVLLLLLVP YVSPYAHAQP LLRHIFYYPY FLKLLAAGDN KNIVDVYTAS DE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZT78]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.