Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58683 | Canola | cytosol | 50.0 | 2.3 |
| CDY16445 | Canola | cytosol, plasma membrane, plastid | 50.0 | 1.24 |
| CDY42145 | Canola | cytosol | 28.57 | 0.68 |
| CDY50335 | Canola | cytosol | 28.57 | 0.68 |
| CDY50551 | Canola | cytosol | 28.57 | 0.68 |
| CDY08436 | Canola | cytosol | 28.57 | 0.61 |
| CDY07932 | Canola | nucleus, plastid | 21.43 | 0.5 |
| CDX73985 | Canola | nucleus | 21.43 | 0.49 |
| CDY21967 | Canola | plasma membrane | 21.43 | 0.4 |
| CDY70132 | Canola | cytosol | 14.29 | 0.38 |
| CDY10435 | Canola | cytosol | 14.29 | 0.38 |
| CDY18182 | Canola | cytosol, peroxisome, plasma membrane | 14.29 | 0.35 |
| CDY40662 | Canola | plasma membrane | 14.29 | 0.35 |
| CDY40658 | Canola | cytosol, peroxisome, plasma membrane | 14.29 | 0.35 |
| CDX74181 | Canola | cytosol, peroxisome, plasma membrane | 14.29 | 0.35 |
| CDY45914 | Canola | cytosol | 7.14 | 0.23 |
| CDY17652 | Canola | cytosol | 7.14 | 0.19 |
| CDY36249 | Canola | cytosol | 7.14 | 0.19 |
| CDX88738 | Canola | plastid | 7.14 | 0.19 |
| CDX95126 | Canola | cytosol | 7.14 | 0.19 |
| CDX71059 | Canola | plastid | 7.14 | 0.18 |
| CDY58363 | Canola | cytosol | 7.14 | 0.18 |
| CDY15549 | Canola | cytosol | 7.14 | 0.18 |
| CDY20943 | Canola | cytosol | 7.14 | 0.17 |
| CDX86566 | Canola | cytosol | 7.14 | 0.17 |
| CDY20635 | Canola | plasma membrane | 7.14 | 0.17 |
| CDY30009 | Canola | cytosol, plasma membrane, plastid | 7.14 | 0.17 |
| CDY69308 | Canola | plasma membrane | 7.14 | 0.17 |
| CDY39673 | Canola | plasma membrane | 7.14 | 0.17 |
| CDY35767 | Canola | cytosol, peroxisome, plasma membrane | 7.14 | 0.16 |
| CDY42071 | Canola | cytosol, nucleus, plasma membrane, plastid | 7.14 | 0.16 |
| CDY48208 | Canola | cytosol | 7.14 | 0.16 |
| CDY34515 | Canola | cytosol, nucleus, plasma membrane, plastid | 7.14 | 0.16 |
| CDY19113 | Canola | cytosol | 7.14 | 0.16 |
| CDY42176 | Canola | cytosol, peroxisome, plasma membrane | 7.14 | 0.15 |
| CDX73200 | Canola | cytosol | 0.0 | 0.0 |
| CDY59983 | Canola | cytosol | 0.0 | 0.0 |
| CDX93618 | Canola | cytosol | 0.0 | 0.0 |
| CDY58682 | Canola | cytosol | 0.0 | 0.0 |
| CDX99605 | Canola | cytosol | 0.0 | 0.0 |
| CDY55069 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY20639 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY48563 | Canola | cytosol, nucleus, plasma membrane, plastid | 0.0 | 0.0 |
| CDY48209 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY45915 | Canola | extracellular, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDY20642 | Canola | nucleus | 0.0 | 0.0 |
| CDY21969 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY16446 | EnsemblPlantsGene:GSBRNA2T00091007001 | ProteinID:CDY16446 | ProteinID:CDY16446.1 | UniParc:UPI0004EDC7DE | UniProt:A0A078FTW1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g12500DBnaA02g12500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTW1]
Coordinates
chrLK032063:+:762344..762388
Molecular Weight (calculated)
1493.8 Da
IEP (calculated)
3.380
GRAVY (calculated)
0.271
Length
14 amino acids
Sequence
(BLAST)
(BLAST)
1: MLLAVGDESN NIDC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.