CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40658	Canola	cytosol, peroxisome, plasma membrane	79.49	81.28
CDY40662	Canola	plasma membrane	79.49	81.28
Bra023774.1-P	Field mustard	plasma membrane	83.39	80.66
CDX74181	Canola	cytosol, peroxisome, plasma membrane	78.81	80.45
VIT_14s0081g00350.t01	Wine grape	cytosol	33.56	37.08
VIT_14s0081g00390.t01	Wine grape	cytosol	28.81	33.14
VIT_14s0081g00420.t01	Wine grape	cytosol	30.51	30.25
VIT_14s0081g00400.t01	Wine grape	cytosol, peroxisome, plasma membrane	35.08	29.61
VIT_14s0081g00360.t01	Wine grape	cytosol	20.68	29.05
PGSC0003DMT400071072	Potato	cytosol	17.29	27.57
Solyc07g061750.2.1	Tomato	cytosol	25.08	25.52
Solyc07g061740.2.1	Tomato	mitochondrion, plasma membrane	21.86	24.95
CDY45914	Canola	cytosol	18.31	24.6
CDY55069	Canola	cytosol, peroxisome, plasma membrane	9.83	24.17
CDY48208	Canola	cytosol	25.42	24.08
CDY35767	Canola	cytosol, peroxisome, plasma membrane	24.75	23.86
CDY70132	Canola	cytosol	20.34	22.77
CDY10435	Canola	cytosol	20.17	22.58
CDX93618	Canola	cytosol	10.51	21.53
CDX88738	Canola	plastid	18.98	20.9
CDX95126	Canola	cytosol	18.98	20.74
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	5.42	20.65
CDX71059	Canola	plastid	18.98	20.51
CDY15549	Canola	cytosol	18.81	19.89
CDY18182	Canola	cytosol, peroxisome, plasma membrane	18.98	19.86
CDY58363	Canola	cytosol	18.31	19.42
CDY42176	Canola	cytosol, peroxisome, plasma membrane	20.68	18.86
CDY42145	Canola	cytosol	18.47	18.63
CDY07932	Canola	nucleus, plastid	18.81	18.53
CDY50335	Canola	cytosol	18.47	18.51
CDY48209	Canola	cytosol, peroxisome, plasma membrane	22.03	18.41
CDY58683	Canola	cytosol	9.49	18.36
CDY50551	Canola	cytosol	18.31	18.34
CDX73985	Canola	nucleus	18.64	18.06
CDY20943	Canola	cytosol	17.46	17.91
CDY20639	Canola	cytosol, peroxisome, plasma membrane	13.9	17.9
CDY16445	Canola	cytosol, plasma membrane, plastid	16.95	17.7
CDY59983	Canola	cytosol	8.98	17.55
CDY17652	Canola	cytosol	15.76	17.45
CDX73200	Canola	cytosol	8.81	17.22
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	18.14	17.2
CDY36249	Canola	cytosol	15.59	17.2
CDX99605	Canola	cytosol	8.31	17.19
CDX86566	Canola	cytosol	16.78	17.16
CDY21969	Canola	nucleus	9.66	17.01
CDY20635	Canola	plasma membrane	16.61	16.81
CDY19113	Canola	cytosol	17.97	16.8
CDY69308	Canola	plasma membrane	16.61	16.53
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	19.83	16.53
CDY08436	Canola	cytosol	18.47	16.52
CDY39673	Canola	plasma membrane	16.78	16.5
CDY21967	Canola	plasma membrane	21.02	16.42
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	17.29	16.27
CDY58682	Canola	cytosol	1.86	13.1
CDY16446	Canola	cytosol	0.17	7.14
CDY20642	Canola	nucleus	13.05	5.4

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	GO:A0A078GY28	UniProt:A0A078GY28	InterPro:ACD6	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY30009	ProteinID:CDY30009	ProteinID:CDY30009.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009719	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0031347
GO:GO:0071446	GO:GO:2000031	EnsemblPlantsGene:GSBRNA2T00044540001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24177
PANTHER:PTHR24177:SF109	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EE69AE	SEG:seg

Description

BnaC01g39990DBnaC01g39990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY28]

Coordinates

chrLK032247:-:435384..437555

Molecular Weight (calculated)

65781.8 Da

IEP (calculated)

7.820

GRAVY (calculated)

0.078

Length

590 amino acids

Sequence
(BLAST)

001: MRNSFTRIET TCLLSSISMM DWRLLTAAAK GETNLLALAN FHHSDFDNVT PQKNNALHIA AKHQRLDFAA AILDLRPSLL LGENNNGDTP IHVAASVGSF
101: QVLQLLLSSA NLDIENRGIT KQLLRTTNKQ KDTALHVSLK SGHVDVAKLL SEQDTGLLDM ANNNNESPLY LAIERGLFDI ADHILATSPS VSSTGPKGMN
201: ALHAAVDSDI VSTGFLTKLM ETRPEMIKEV DSMGWTPLHY SVWLGKVEMT RLLLQQDISA AYISDKEGQC PLHLAAATGQ IEAYRELVGS CPYVWELVDG
301: KGRTSLHSAV MSRQRGIIDC ILQMPDISLH LLNESDVDGN TPLHLSVVYK CHAILLLLLR DKRVDKRVVN RDQLTAAELF YSQKQEISFK VAMAYYSLQR
401: YYKQPSKQQN IETKKQEKAD VARNDGAMYE VHLLVAVLVA TVAFAAAFQL PGGYKPDGTP TLMEEAAFKC FLVFDTIAFC FSVSTVYFLF YASRDGFRAR
501: SAFLYMSCLL MVVSLIAMAS AFASGMYLIT SKTRALAIVP FLMVGFFVLH GFLYWFFDPR GSYVLGLERP RRFFRKLVYR NSLVHALVCD

Best Arabidopsis Sequence Match ( AT4G03460.1 )
(BLAST)

001: MGRSDLDFDR QKKDASSRMF YADETGRTHS LDLSTLFNDT SETVPMGPKT IAAVRAGDET YLRDMKFDVN IALSSVNDHG NTMLHLAAAA GHTDLVCYIL
101: NAYPGLLMKS NSMGEVALHV AAGAGHLAVV EALVSFIKDI SCNKPGVAKK IYFAKDRHQD NALHVSLKRK HLKVASCLVC AEQSLSFVAN NDGVSPLYLA
201: VEAGQADLAK TMWQHSNNGS SSTSTLASKI GGRSIVHGAM KARRKDILVA ILSEDASLIN FRDEGRTCLS FGASLGYYEG FCYLLDKALD SVYVSDDDGS
301: FPIHMAVKYG YVKILKAILK RCPDALELLD RENQNVLHVA AKNGKIEVLK FILRCCKDKN KEKLINEEDA NGNTPLHLAT KNWHPKVVSM LTWDNRVDLK
401: TLNHDGVTAL DIAEKNMDSS YTFFERLTWM ALISAGAPRG PKLILSTPVT QNSDGGKYKD RVNTLLLVAT LVATMTFTAG FTLPGGYNGS VPNFGMATLA
501: KKTAFQVFLV FDTLAMYCSI ITIVALIWAQ LGDLSLIMKA FNLALPLLGL ALTSMSIAFM AGTYAAVSHL PLLAYFILGI GLIFLLVLLL IIIPYVSPHS
601: PTQPFLRHIF YYPYFLMLLV AGDNRNKY

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G03460]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.