CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20943	Canola	cytosol	91.27	72.7
Bra018444.1-P	Field mustard	cytosol	91.27	70.49
AT1G10340.1	Thale cress	cytosol	76.42	60.55
CDY20635	Canola	plasma membrane	76.2	59.86
CDY69308	Canola	plasma membrane	66.59	51.43
CDY39673	Canola	plasma membrane	65.07	49.67
VIT_09s0002g03920.t01	Wine grape	cytosol	34.06	27.27
KRH09919	Soybean	cytosol, peroxisome, plasma membrane	35.37	25.04
VIT_09s0002g03910.t01	Wine grape	plasma membrane	37.77	23.99
CDX93618	Canola	cytosol	13.97	22.22
CDY55069	Canola	cytosol, peroxisome, plasma membrane	11.35	21.67
CDY20642	Canola	nucleus	67.25	21.58
CDY45915	Canola	extracellular, plasma membrane, plastid, vacuole	6.33	18.71
CDX95126	Canola	cytosol	20.09	17.04
CDY59983	Canola	cytosol	10.92	16.56
CDY58363	Canola	cytosol	19.87	16.37
CDX99605	Canola	cytosol	10.04	16.14
CDX73200	Canola	cytosol	10.48	15.89
CDX88738	Canola	plastid	18.34	15.67
CDY15549	Canola	cytosol	19.0	15.59
CDX71059	Canola	plastid	18.56	15.57
CDY07932	Canola	nucleus, plastid	20.09	15.36
CDX73985	Canola	nucleus	20.09	15.11
CDY58683	Canola	cytosol	10.04	15.08
CDY42071	Canola	cytosol, nucleus, plasma membrane, plastid	20.31	14.95
CDY19113	Canola	cytosol	20.31	14.74
CDY10435	Canola	cytosol	16.81	14.61
CDY70132	Canola	cytosol	16.81	14.61
CDY36249	Canola	cytosol	17.03	14.58
CDY34515	Canola	cytosol, nucleus, plasma membrane, plastid	19.87	14.51
CDY42145	Canola	cytosol	18.34	14.36
CDY50335	Canola	cytosol	18.34	14.26
CDY17652	Canola	cytosol	16.59	14.26
CDY50551	Canola	cytosol	18.12	14.09
CDY30009	Canola	cytosol, plasma membrane, plastid	17.9	13.9
CDX86566	Canola	cytosol	17.25	13.69
CDY40658	Canola	cytosol, peroxisome, plasma membrane	16.81	13.34
CDX74181	Canola	cytosol, peroxisome, plasma membrane	16.59	13.15
CDY40662	Canola	plasma membrane	16.38	13.0
CDY35767	Canola	cytosol, peroxisome, plasma membrane	17.25	12.91
CDY18182	Canola	cytosol, peroxisome, plasma membrane	15.72	12.77
CDY16445	Canola	cytosol, plasma membrane, plastid	15.5	12.57
CDY08436	Canola	cytosol	17.9	12.42
CDY48208	Canola	cytosol	16.38	12.04
CDY45914	Canola	cytosol	10.92	11.39
CDY42176	Canola	cytosol, peroxisome, plasma membrane	14.19	10.05
CDY21967	Canola	plasma membrane	15.28	9.27
CDY48209	Canola	cytosol, peroxisome, plasma membrane	13.32	8.64
CDY48563	Canola	cytosol, nucleus, plasma membrane, plastid	11.57	7.49
CDY21969	Canola	nucleus	2.4	3.28
CDY58682	Canola	cytosol	0.0	0.0
CDY16446	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	GO:A0A078G5K8	UniProt:A0A078G5K8	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY20639	ProteinID:CDY20639	ProteinID:CDY20639.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00012819001	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFAM:PF13962	InterPro:PGG_dom	PFscan:PS50297
PANTHER:PTHR24177	PANTHER:PTHR24177:SF18	SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI0004EE1B73
SEG:seg	:	:	:	:	:

Description

BnaC08g14190DBnaC08g14190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5K8]

Coordinates

chrLK032110:+:402296..404350

Molecular Weight (calculated)

50245.9 Da

IEP (calculated)

7.326

GRAVY (calculated)

0.181

Length

458 amino acids

Sequence
(BLAST)

001: MTMLEFGPEA CSARNNNNQT PLHLACRSNS VESATLFAEK IQSVGLHELN FAILSGMAGI AGTILERFPD LAREEAWPVQ GGSLSSLLHH ACDRGDLELT
101: RILLGVDERL DEALDTNGLS PLHLAVLRGS VVILEEFLNT APLSFYSLTP SKESVFHLAA RNNNMDAFVF MAESVGINSQ ILLQQTDEDG NTVLHVAASV
201: ACGAPFVHYI RKRTDKRCKN NIGFAAYQLI PQEAVNFELL SRWLRFDTET PEELNSEEYD AICGSSDADK VIRLLTLIGI NTTTIAERKR KMAVLIASVT
301: YAGGINPPGG VYQDGPWKGK STVGKTTAFK VFAICNNIAL FTSLAIVILL VSVIPYKRKP LKRLLVATHR MMWVSIGFMA ASYIAASWVT IPHYHGTRWL
401: FPGIIAVGGG ALIVLFSYLL VEIIGHWFKK LNRVGDIPSF ARTCSDMAVS GKSGYFIY

Best Arabidopsis Sequence Match ( AT1G10340.1 )
(BLAST)

001: MQPIFHAILK NDLPAFLELV EDSESSLEER NEEEHLNNTV LHMAAKFGHR ELVSKIIELR PSLVSSRNAY RNTPLHLAAI LGDVNIVMQM LETGLEVCSA
101: RNINNHTPLH LACRSNSIEA ARLIAEKTQS IGLGELILAI SSGSTSIVGT ILERFPDLAR EEAWVVEDGS QSTLLHHACD KGDFELTTIL LGLDQGLEEA
201: LNPNGLSPLH LAVLRGSVVI LEEFLDKVPL SFSSITPSKE TVFHLAARNK NMDAFVFMAE SLGINSQILL QQTDESGNTV LHIAASVSFD APLIRYIVGK
301: NIVDITSKNK MGFEAFQLLP REAQDFELLS RWLRFGTETS QELDSENNVE QHEGSQEVEV IRLLRIIGIN TSEIAERKRS KEQEVERGRQ NLEYQMHIEA
401: LQNARNTIAI VAVLIASVAY AGGINPPGGV YQDGPWRGKS LVGKTTAFKV FAICNNIALF TSLGIVILLV SIIPYKRKPL KRLLVATHRM MWVSVGFMAT
501: AYIAASWVTI PHYHGTQWLF PAIVAVAGGA LTVLFFYLGV ETIGHWFKKM NRVGDNIPSF ARTSSDLAVS GKSGYFTY

Arabidopsis Description

Ankyrin repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SY76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.